Detailed information NTG0640192

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: FH100_RS10100
• Genome accession: NZ_CP090011
• Coordinates: 2005418..2006392 (+)
• Length: 324 a.a.
• NCBI ID: WP_002449861.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain acrlg
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2000418..2011392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH100_RS10065 (FH100_10040)	rpmG	2000880..2001029 (+)	150	WP_002449881.1	50S ribosomal protein L33	-
FH100_RS10070 (FH100_10045)	-	2001238..2001789 (+)	552	WP_002449726.1	5-formyltetrahydrofolate cyclo-ligase	-
FH100_RS10075 (FH100_10050)	-	2001789..2003246 (+)	1458	WP_002488530.1	rhomboid family protein	-
FH100_RS10080 (FH100_10055)	-	2003230..2003433 (+)	204	WP_037555982.1	YqgQ family protein	-
FH100_RS10085 (FH100_10060)	-	2003430..2004416 (+)	987	WP_002449785.1	ROK family glucokinase	-
FH100_RS10090 (FH100_10065)	-	2004416..2004739 (+)	324	WP_002488539.1	MTH1187 family thiamine-binding protein	-
FH100_RS10095 (FH100_10070)	-	2004741..2005367 (+)	627	WP_002488554.1	MBL fold metallo-hydrolase	-
FH100_RS10100 (FH100_10075)	comGA	2005418..2006392 (+)	975	WP_002449861.1	competence type IV pilus ATPase ComGA	Machinery gene
FH100_RS10105 (FH100_10080)	comGB	2006364..2007428 (+)	1065	WP_002455292.1	competence type IV pilus assembly protein ComGB	-
FH100_RS10110 (FH100_10085)	comGC	2007447..2007758 (+)	312	WP_002488514.1	competence type IV pilus major pilin ComGC	Machinery gene
FH100_RS10115 (FH100_10090)	comGD	2007748..2008182 (+)	435	WP_002449773.1	competence type IV pilus minor pilin ComGD	-
FH100_RS10120 (FH100_10095)	-	2008374..2008871 (+)	498	WP_002449908.1	competence protein ComG	-
FH100_RS10125 (FH100_10100)	-	2009036..2009545 (+)	510	WP_002449809.1	shikimate kinase	-
FH100_RS10130 (FH100_10105)	gcvT	2009737..2010828 (+)	1092	WP_002488553.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36955.92 Da
• Isoelectric Point: 8.2269

>NTDB_id=640192 FH100_RS10100 WP_002449861.1 2005418..2006392(+) (comGA) [Staphylococcus hominis strain acrlg]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI

Nucleotide

• Length: 975 bp

>NTDB_id=640192 FH100_RS10100 WP_002449861.1 2005418..2006392(+) (comGA) [Staphylococcus hominis strain acrlg]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698