Detailed information NTG0640190

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FH100_RS09750
• Genome accession: NZ_CP090011
• Coordinates: 1939390..1941804 (+)
• Length: 804 a.a.
• NCBI ID: WP_002448987.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain acrlg
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1934390..1946804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH100_RS09720 (FH100_09695)	cymR	1934397..1934819 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
FH100_RS09725 (FH100_09700)	-	1934929..1935072 (+)	144	WP_002448973.1	SAS049 family protein	-
FH100_RS09730 (FH100_09705)	-	1935171..1936175 (-)	1005	WP_002448980.1	LLM class flavin-dependent oxidoreductase	-
FH100_RS09735 (FH100_09710)	-	1936375..1937514 (+)	1140	WP_002488002.1	cysteine desulfurase family protein	-
FH100_RS09740 (FH100_09715)	mnmA	1937518..1938630 (+)	1113	WP_002448998.1	tRNA 2-thiouridine(34) synthase MnmA	-
FH100_RS09745 (FH100_09720)	-	1938717..1939388 (+)	672	WP_002488003.1	tetratricopeptide repeat protein	-
FH100_RS09750 (FH100_09725)	recD2	1939390..1941804 (+)	2415	WP_002448987.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FH100_RS09755 (FH100_09730)	alaS	1942084..1944714 (+)	2631	WP_002448976.1	alanine--tRNA ligase	-
FH100_RS09760 (FH100_09735)	-	1944779..1945039 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
FH100_RS09765 (FH100_09740)	ruvX	1945040..1945468 (+)	429	WP_002448946.1	Holliday junction resolvase RuvX	-
FH100_RS09770 (FH100_09745)	-	1945483..1945791 (+)	309	WP_002448965.1	DUF1292 domain-containing protein	-
FH100_RS09775 (FH100_09750)	-	1946051..1946686 (+)	636	WP_002448992.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 91354.90 Da
• Isoelectric Point: 4.8858

>NTDB_id=640190 FH100_RS09750 WP_002448987.1 1939390..1941804(+) (recD2) [Staphylococcus hominis strain acrlg]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIIDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPTVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEKNDEQINIDDNNAVEHITLSEETIYQINPMINMGNVSPYD
FVEH

Nucleotide

• Length: 2415 bp

>NTDB_id=640190 FH100_RS09750 WP_002448987.1 1939390..1941804(+) (recD2) [Staphylococcus hominis strain acrlg]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGCTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGGCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCAAATGATAATATTTTTAATGGTGATATTGGAGTCATAGTAGGTATATTC
TGGGCTAAAGAAAATGCACTTAACAAAGATGTACTGATTATCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
CTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGACCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAAAGAATGATGAACAGATAAATATAGATGATAATAATGCAG
TTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCACCTTACGAC
TTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.438	99.627	0.493