Detailed information NTG0639349

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: LXA46_RS09065
• Genome accession: NZ_CP089948
• Coordinates: 1815249..1815644 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TIGR4
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1810249..1820644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXA46_RS09040 (LXA46_09030)	-	1810512..1811045 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
LXA46_RS09045 (LXA46_09035)	-	1811399..1811605 (-)	207	WP_000768520.1	transcriptional regulator	-
LXA46_RS09050 (LXA46_09040)	-	1811766..1813072 (+)	1307	Protein_1799	transposase	-
LXA46_RS09055 (LXA46_09045)	groL	1813171..1814793 (-)	1623	WP_000031573.1	chaperonin GroEL	-
LXA46_RS09060 (LXA46_09050)	groES	1814809..1815093 (-)	285	WP_000917330.1	co-chaperone GroES	-
LXA46_RS09065 (LXA46_09055)	ssbB/cilA	1815249..1815644 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
LXA46_RS09070 (LXA46_09060)	-	1815722..1816483 (-)	762	WP_001107746.1	SDR family NAD(P)-dependent oxidoreductase	-
LXA46_RS09075 (LXA46_09065)	ytpR	1816525..1817151 (-)	627	WP_000578285.1	YtpR family tRNA-binding protein	-
LXA46_RS09080 (LXA46_09070)	-	1817167..1817484 (-)	318	WP_000615765.1	thioredoxin family protein	-
LXA46_RS09085 (LXA46_09075)	-	1817481..1817780 (-)	300	WP_001013974.1	DUF4651 domain-containing protein	-
LXA46_RS10970	-	1817874..1818005 (+)	132	WP_001811306.1	hypothetical protein	-
LXA46_RS09090 (LXA46_09080)	-	1818030..1818110 (-)	81	WP_223200463.1	hypothetical protein	-
LXA46_RS09095 (LXA46_09085)	-	1818117..1818308 (-)	192	WP_000291826.1	cell wall-binding protein	-
LXA46_RS09100 (LXA46_09090)	-	1818469..1819143 (-)	675	WP_000725749.1	membrane protein	-
LXA46_RS09105 (LXA46_09095)	-	1819149..1819595 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
LXA46_RS09110 (LXA46_09100)	-	1819709..1820212 (-)	504	WP_000800931.1	phosphatase PAP2 family protein	-
LXA46_RS09115 (LXA46_09105)	-	1820209..1820571 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=639349 LXA46_RS09065 WP_000282442.1 1815249..1815644(-) (ssbB/cilA) [Streptococcus pneumoniae TIGR4]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=639349 LXA46_RS09065 WP_000282442.1 1815249..1815644(-) (ssbB/cilA) [Streptococcus pneumoniae TIGR4]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366