Detailed information NTG0595146

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: K2O50_RS24890
• Genome accession: NZ_CP081016
• Coordinates: 5524903..5526126 (-)
• Length: 407 a.a.
• NCBI ID: WP_052896131.1
• Uniprot ID: -
• Organism: Pseudomonas sp. 2hn
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5519903..5531126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K2O50_RS24875 (K2O50_24875)	-	5521558..5523171 (-)	1614	WP_050707341.1	AAA family ATPase	-
K2O50_RS24880 (K2O50_24880)	aroB	5523187..5524284 (-)	1098	WP_050707342.1	3-dehydroquinate synthase	-
K2O50_RS24885 (K2O50_24885)	aroK	5524380..5524898 (-)	519	WP_050707343.1	shikimate kinase AroK	-
K2O50_RS24890 (K2O50_24890)	pilQ	5524903..5526126 (-)	1224	WP_052896131.1	type IV pilus secretin PilQ	Machinery gene
K2O50_RS24895 (K2O50_24895)	-	5526083..5527033 (-)	951	WP_050707345.1	pilus assembly protein PilP	-
K2O50_RS24900 (K2O50_24900)	-	5527093..5527632 (-)	540	WP_050707346.1	PilN domain-containing protein	-
K2O50_RS24905 (K2O50_24905)	pilM	5527629..5528525 (-)	897	WP_050707347.1	type IV pilus biogenesis protein PilM	-

Sequence

Protein

• Length: 407 a.a.
• Molecular weight: 44173.74 Da
• Isoelectric Point: 4.8362

>NTDB_id=595146 K2O50_RS24890 WP_052896131.1 5524903..5526126(-) (pilQ) [Pseudomonas sp. 2hn]
MLGLPMVQAGTFQGEPMSLNFQDVELRSVLQVMADHAGINLVAGDSVQGRITLRLEDVPWDQALDLVLRSKGLGRRQEGN
VLLVAPVAELAGQAQDMRQEVLLEPLQRELIPVFHAKAGELAELLLSSLADDGALAGRGSLSVDARTNTLVATQPAARLA
ELRRLVTQLDVPVRQVMIEARIVEANVDYEKALGVRWGGPLYGTDRQLGSDLFVDLGVERAAAGLGVGLLRSDILLDLEL
SAMEKSGNGEIISQPKVVTADKETARILKGTEVPYQETTRSGATSVSFREASLSLEVTPQITPDGKVIMAVRVTKDEPDF
INALNDVPPIRKNEVNAKVRVTDGQTIVIGGVYSTSQNKVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMSD
QAIAVSR

Nucleotide

• Length: 1224 bp

>NTDB_id=595146 K2O50_RS24890 WP_052896131.1 5524903..5526126(-) (pilQ) [Pseudomonas sp. 2hn]
ATGCTGGGGCTGCCGATGGTGCAGGCCGGGACGTTTCAGGGTGAGCCGATGTCGCTCAACTTCCAGGATGTCGAATTGCG
TTCGGTGCTTCAGGTCATGGCCGACCACGCGGGCATCAACCTGGTGGCGGGCGACTCGGTGCAGGGGCGGATAACCCTGC
GTCTGGAGGATGTGCCCTGGGACCAGGCGCTTGACCTGGTGCTGCGCAGCAAGGGGCTGGGCAGGCGCCAGGAGGGGAAT
GTGCTGTTGGTCGCTCCCGTGGCCGAGCTCGCCGGGCAAGCCCAGGACATGCGTCAGGAGGTATTGCTAGAGCCACTGCA
GCGTGAATTGATCCCTGTCTTCCATGCCAAGGCCGGCGAGCTGGCGGAGCTGCTGTTGTCGAGCCTGGCCGATGACGGTG
CCCTGGCCGGGCGTGGCAGCCTCAGTGTGGACGCCCGCACCAATACACTGGTGGCTACTCAGCCTGCCGCCCGGCTCGCC
GAACTGCGCAGGCTGGTCACGCAACTGGATGTACCGGTGCGCCAGGTCATGATCGAGGCCCGGATCGTCGAGGCCAATGT
CGATTACGAAAAGGCCCTGGGCGTGCGCTGGGGTGGCCCTCTGTATGGCACGGATCGCCAGTTGGGCAGCGACCTGTTCG
TCGATCTCGGCGTCGAACGCGCCGCTGCCGGGCTCGGAGTGGGGCTGCTGCGCAGCGATATCCTGCTCGACCTGGAGCTC
AGCGCCATGGAAAAAAGCGGCAACGGCGAGATCATCTCCCAGCCAAAGGTGGTCACGGCCGACAAGGAAACCGCGCGCAT
ACTCAAGGGCACCGAAGTGCCCTACCAGGAAACCACTCGCAGCGGCGCCACGTCGGTCTCTTTCCGCGAGGCGTCCCTGT
CGCTGGAGGTGACCCCGCAGATCACGCCGGACGGCAAGGTGATCATGGCGGTGCGGGTGACCAAGGATGAGCCGGACTTC
ATCAATGCCCTCAACGATGTGCCGCCGATCCGCAAGAACGAGGTCAACGCCAAGGTGCGGGTGACCGATGGGCAGACCAT
TGTGATTGGTGGCGTGTACTCGACGTCGCAGAACAAAGTGGTCGACAAGGTGCCATTTTTTGGCGATCTGCCGTATGTTG
GGCGGCTGTTTCGACGCGATGCATTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTGACTCCGCGTATCATGAGTGAC
CAGGCGATTGCTGTGAGTCGTTGA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (242-398)

• Bacterial type II/III secretion system short domain (Secretin_N) (110-175)

• Secretin and TonB N terminus short domain (STN) (40-86)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	58.716	100	0.629
pilQ	Acinetobacter baumannii D1279779	42.609	100	0.482
pilQ	Acinetobacter baumannii strain A118	42.609	100	0.482
comQ	Acinetobacter baylyi ADP1	43.146	100	0.472
pilQ	Legionella pneumophila strain ERS1305867	44.258	100	0.455
pilQ	Legionella pneumophila strain Lp02	43.78	100	0.45
pilQ	Vibrio campbellii strain DS40M4	40.326	100	0.425
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	39.905	100	0.413
pilQ	Vibrio cholerae strain A1552	39.905	100	0.413
pilQ	Neisseria gonorrhoeae strain FA1090	36.754	100	0.378
pilQ	Neisseria meningitidis MC58	36.277	100	0.373
pilQ	Neisseria meningitidis M1080	36.277	100	0.373