Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   D8S83_RS11570 Genome accession   NZ_AP018349
Coordinates   2268667..2269137 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain GN1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2263667..2274137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S83_RS11550 coaW 2263976..2264779 (+) 804 WP_000862728.1 type II pantothenate kinase -
  D8S83_RS11555 - 2264909..2265580 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  D8S83_RS11560 - 2265979..2267172 (-) 1194 WP_000183707.1 hypothetical protein -
  D8S83_RS11565 - 2267172..2268356 (-) 1185 WP_001291506.1 M20 family metallopeptidase -
  D8S83_RS11570 luxS 2268667..2269137 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  D8S83_RS11575 - 2269289..2269639 (-) 351 WP_001024035.1 membrane protein -
  D8S83_RS11580 - 2269653..2270954 (-) 1302 WP_001242306.1 pyrimidine-nucleoside phosphorylase -
  D8S83_RS11590 deoC 2271235..2271897 (-) 663 WP_001083335.1 deoxyribose-phosphate aldolase -
  D8S83_RS11595 deoD 2272211..2272921 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  D8S83_RS11600 - 2273042..2273485 (-) 444 WP_000070865.1 Dps family protein -
  D8S83_RS11605 - 2273685..2274098 (-) 414 WP_020977457.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=58209 D8S83_RS11570 WP_000164421.1 2268667..2269137(+) (luxS) [Staphylococcus aureus strain GN1]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=58209 D8S83_RS11570 WP_000164421.1 2268667..2269137(+) (luxS) [Staphylococcus aureus strain GN1]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment