Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | SPN034183_RS09960 | Genome accession | NC_021028 |
| Coordinates | 1832985..1833287 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae SPN034183 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1827985..1838287
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN034183_RS09925 (SPN034183_18030) | rnpA | 1828664..1829035 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| SPN034183_RS13355 | - | 1829052..1829183 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| SPN034183_RS09930 (SPN034183_18040) | - | 1829184..1830374 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| SPN034183_RS09935 (SPN034183_18050) | comYH | 1830425..1831378 (-) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPN034183_RS12025 (SPN034183_18060) | - | 1831439..1832033 (-) | 595 | Protein_1877 | methyltransferase domain-containing protein | - |
| SPN034183_RS09950 (SPN034183_18070) | comGG/cglG | 1832170..1832583 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SPN034183_RS09955 (SPN034183_18080) | comGF/cglF | 1832561..1833022 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPN034183_RS09960 (SPN034183_18090) | comGE/cglE | 1832985..1833287 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPN034183_RS09965 (SPN034183_18100) | comGD/cglD | 1833250..1833654 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPN034183_RS09970 (SPN034183_18110) | comGC/cglC | 1833647..1833973 (-) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| SPN034183_RS09975 (SPN034183_18120) | comGB/cglB | 1833975..1834991 (-) | 1017 | WP_078160205.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPN034183_RS09980 (SPN034183_18130) | comGA/cglA/cilD | 1834939..1835880 (-) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPN034183_RS09985 (SPN034183_18140) | - | 1835956..1836321 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| SPN034183_RS09990 (SPN034183_18150) | - | 1836472..1837530 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=58205 SPN034183_RS09960 WP_000413382.1 1832985..1833287(-) (comGE/cglE) [Streptococcus pneumoniae SPN034183]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=58205 SPN034183_RS09960 WP_000413382.1 1832985..1833287(-) (comGE/cglE) [Streptococcus pneumoniae SPN034183]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |