Detailed information NTG0058204

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SPN034183_RS09955
• Genome accession: NC_021028
• Coordinates: 1832561..1833022 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250542.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae SPN034183
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1827561..1838022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN034183_RS09920 (SPN034183_18020)	-	1827865..1828689 (-)	825	WP_001809383.1	membrane protein insertase YidC	-
SPN034183_RS09925 (SPN034183_18030)	rnpA	1828664..1829035 (-)	372	WP_000739244.1	ribonuclease P protein component	-
SPN034183_RS13355	-	1829052..1829183 (-)	132	WP_000768904.1	hypothetical protein	-
SPN034183_RS09930 (SPN034183_18040)	-	1829184..1830374 (-)	1191	WP_000167765.1	acetate kinase	-
SPN034183_RS09935 (SPN034183_18050)	comYH	1830425..1831378 (-)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
SPN034183_RS12025 (SPN034183_18060)	-	1831439..1832033 (-)	595	Protein_1877	methyltransferase domain-containing protein	-
SPN034183_RS09950 (SPN034183_18070)	comGG/cglG	1832170..1832583 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPN034183_RS09955 (SPN034183_18080)	comGF/cglF	1832561..1833022 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPN034183_RS09960 (SPN034183_18090)	comGE/cglE	1832985..1833287 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPN034183_RS09965 (SPN034183_18100)	comGD/cglD	1833250..1833654 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPN034183_RS09970 (SPN034183_18110)	comGC/cglC	1833647..1833973 (-)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
SPN034183_RS09975 (SPN034183_18120)	comGB/cglB	1833975..1834991 (-)	1017	WP_078160205.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPN034183_RS09980 (SPN034183_18130)	comGA/cglA/cilD	1834939..1835880 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
SPN034183_RS09985 (SPN034183_18140)	-	1835956..1836321 (-)	366	WP_000286415.1	DUF1033 family protein	-
SPN034183_RS09990 (SPN034183_18150)	-	1836472..1837530 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17918.53 Da
• Isoelectric Point: 9.3137

>NTDB_id=58204 SPN034183_RS09955 WP_000250542.1 1832561..1833022(-) (comGF/cglF) [Streptococcus pneumoniae SPN034183]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=58204 SPN034183_RS09955 WP_000250542.1 1832561..1833022(-) (comGF/cglF) [Streptococcus pneumoniae SPN034183]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTACTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae D39	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae R6	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae TIGR4	96.078	100	0.961
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909