Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   KIP81_RS02075 Genome accession   NZ_CP075172
Coordinates   389309..389785 (+) Length   158 a.a.
NCBI ID   WP_039697626.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 384309..394785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS02075 (KIP81_02085) comX/sigX 389309..389785 (+) 477 WP_039697626.1 sigma-70 family RNA polymerase sigma factor Regulator
  KIP81_RS02080 (KIP81_02090) - 389821..391179 (-) 1359 WP_074567217.1 aspartate kinase -
  KIP81_RS02085 (KIP81_02095) - 391280..391936 (+) 657 WP_074669298.1 HAD family phosphatase -
  KIP81_RS02090 (KIP81_02100) - 392119..392907 (+) 789 WP_243603067.1 enoyl-CoA hydratase -
  KIP81_RS02095 (KIP81_02105) - 393023..393457 (+) 435 WP_039695988.1 MarR family transcriptional regulator -
  KIP81_RS02100 (KIP81_02110) - 393460..394434 (+) 975 WP_074630042.1 beta-ketoacyl-ACP synthase III -
  KIP81_RS02105 (KIP81_02115) - 394493..394717 (+) 225 WP_003067534.1 acyl carrier protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19314.13 Da        Isoelectric Point: 8.7333

>NTDB_id=568233 KIP81_RS02075 WP_039697626.1 389309..389785(+) (comX/sigX) [Streptococcus equinus strain SheepZ001]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPDVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=568233 KIP81_RS02075 WP_039697626.1 389309..389785(+) (comX/sigX) [Streptococcus equinus strain SheepZ001]
GTGGATTTTGAAAGTTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCACTACTTTGTGAAATTATGGGA
TTACGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGATGTTCTCATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTCCCTCAGCTTAATTTTTTTGAAGTGGCTGA
TTTCATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAGGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.