Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   MK616_RS08540 Genome accession   NZ_CP092778
Coordinates   1682533..1683801 (+) Length   422 a.a.
NCBI ID   WP_014721183.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain WF2020     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1677533..1688801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK616_RS08515 (MK616_08515) pyrH 1678328..1679050 (+) 723 WP_003154213.1 UMP kinase -
  MK616_RS08520 (MK616_08520) frr 1679053..1679610 (+) 558 WP_003154212.1 ribosome recycling factor -
  MK616_RS08525 (MK616_08525) - 1679736..1680518 (+) 783 WP_007611457.1 isoprenyl transferase -
  MK616_RS08530 (MK616_08530) - 1680522..1681319 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  MK616_RS08535 (MK616_08535) dxr 1681375..1682526 (+) 1152 WP_061890602.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  MK616_RS08540 (MK616_08540) eeP 1682533..1683801 (+) 1269 WP_014721183.1 RIP metalloprotease RseP Regulator
  MK616_RS08545 (MK616_08545) proS 1683833..1685527 (+) 1695 WP_061890603.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46504.45 Da        Isoelectric Point: 6.8866

>NTDB_id=568233 MK616_RS08540 WP_014721183.1 1682533..1683801(+) (eeP) [Bacillus amyloliquefaciens strain WF2020]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLGKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLLRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=568233 MK616_RS08540 WP_014721183.1 1682533..1683801(+) (eeP) [Bacillus amyloliquefaciens strain WF2020]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTGGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTTAAA
CCCGGTTATACCGTCGGACTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCAGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAGCCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATCGCCTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGGGCAAAATTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGCATCAT
CAACTTATTGCGGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4