Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   KIP81_RS01805 Genome accession   NZ_CP075172
Coordinates   333365..333841 (+) Length   158 a.a.
NCBI ID   WP_039697626.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 328365..338841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS01805 (KIP81_01815) comX/sigX 333365..333841 (+) 477 WP_039697626.1 sigma-70 family RNA polymerase sigma factor Regulator
  KIP81_RS01810 (KIP81_01820) - 334039..334305 (+) 267 WP_021141631.1 ACT domain-containing protein -
  KIP81_RS01815 (KIP81_01825) - 334317..335654 (+) 1338 WP_243603049.1 PFL family protein -
  KIP81_RS01820 (KIP81_01830) - 335852..336556 (+) 705 WP_243603050.1 histidine phosphatase family protein -
  KIP81_RS01825 (KIP81_01835) - 336540..337313 (+) 774 WP_243603051.1 M15 family metallopeptidase -
  KIP81_RS01830 (KIP81_01840) - 337310..337900 (+) 591 WP_243603052.1 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19314.13 Da        Isoelectric Point: 8.7333

>NTDB_id=568229 KIP81_RS01805 WP_039697626.1 333365..333841(+) (comX/sigX) [Streptococcus equinus strain SheepZ001]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPDVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=568229 KIP81_RS01805 WP_039697626.1 333365..333841(+) (comX/sigX) [Streptococcus equinus strain SheepZ001]
GTGGATTTTGAAAGTTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCACTACTTTGTGAAATTATGGGA
TTACGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGATGTTCTCATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTCCCTCAGCTTAATTTTTTTGAAGTGGCTGA
TTTCATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAGGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.