Detailed information
Bioinformatically predicted
Overview
| Name | pilQ | Type | Machinery gene |
| Locus tag | BV82_RS02105 | Genome accession | NZ_CP071706 |
| Coordinates | 453659..454900 (+) | Length | 413 a.a. |
| NCBI ID | WP_051636761.1 | Uniprot ID | - |
| Organism | Pseudomonas donghuensis strain P482 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 448659..459900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV82_RS02090 (BV82_2560) | - | 449077..451530 (-) | 2454 | WP_374045261.1 | penicillin-binding protein 1A | - |
| BV82_RS02095 (BV82_2561) | pilM | 451539..452786 (+) | 1248 | WP_159387996.1 | pilus assembly protein PilM | - |
| BV82_RS02100 (BV82_2562) | - | 452783..453634 (+) | 852 | WP_036995402.1 | pilus assembly protein PilP | - |
| BV82_RS02105 (BV82_2563) | pilQ | 453659..454900 (+) | 1242 | WP_051636761.1 | type IV pilus secretin PilQ | Machinery gene |
| BV82_RS02110 (BV82_2564) | aroK | 454905..455423 (+) | 519 | WP_010222231.1 | shikimate kinase AroK | - |
| BV82_RS02115 (BV82_2565) | aroB | 455522..456619 (+) | 1098 | WP_010222232.1 | 3-dehydroquinate synthase | - |
| BV82_RS02120 (BV82_2566) | - | 456636..458258 (+) | 1623 | WP_036995403.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 413 a.a. Molecular weight: 44342.85 Da Isoelectric Point: 5.3544
>NTDB_id=547111 BV82_RS02105 WP_051636761.1 453659..454900(+) (pilQ) [Pseudomonas donghuensis strain P482]
MGKGGVIAALIGGCLFAGVVAGKQLYGGEPLSLNFQDVEVRTVLQVLADFSGVNLVASDAVQGKVTLRLQDVPWDQALDL
VLRSKGLEQRKDGNVLLVAPRAELAGSAPSRRELIPIHHAKAADIAELFHALMAYEAGGASHGSLSVDERTNTLVASQPP
ERLEELRRLIGELDVPVRQVMIEARIVEANVDFEKALGVRWGGAVQVGKGLSLGSADTFVDLGVDRAASSIGVGLVRNNV
LLDLELSAMEKTGNGEIISQPKVVTADKETARILKGTEVPYQETSGSGATSVTFREASLSLEVTPQITPDNRVIMAVKVT
KDEPDYLNALDHVPAIRKNEVNAKVRINDGETIVIGGVYSTVQSKVVDKVPFFGDVPYVGRLFRRDVLQEKKSELLVFLT
PRIMSDQAIAVSR
MGKGGVIAALIGGCLFAGVVAGKQLYGGEPLSLNFQDVEVRTVLQVLADFSGVNLVASDAVQGKVTLRLQDVPWDQALDL
VLRSKGLEQRKDGNVLLVAPRAELAGSAPSRRELIPIHHAKAADIAELFHALMAYEAGGASHGSLSVDERTNTLVASQPP
ERLEELRRLIGELDVPVRQVMIEARIVEANVDFEKALGVRWGGAVQVGKGLSLGSADTFVDLGVDRAASSIGVGLVRNNV
LLDLELSAMEKTGNGEIISQPKVVTADKETARILKGTEVPYQETSGSGATSVTFREASLSLEVTPQITPDNRVIMAVKVT
KDEPDYLNALDHVPAIRKNEVNAKVRINDGETIVIGGVYSTVQSKVVDKVPFFGDVPYVGRLFRRDVLQEKKSELLVFLT
PRIMSDQAIAVSR
Nucleotide
Download Length: 1242 bp
>NTDB_id=547111 BV82_RS02105 WP_051636761.1 453659..454900(+) (pilQ) [Pseudomonas donghuensis strain P482]
ATGGGCAAGGGAGGTGTTATTGCAGCGCTGATAGGGGGCTGTCTGTTTGCCGGCGTCGTTGCGGGGAAGCAGCTGTATGG
TGGCGAGCCGCTGTCGCTTAATTTCCAGGATGTCGAGGTACGTACGGTATTGCAGGTGCTGGCCGACTTTTCCGGGGTCA
ACCTGGTGGCCAGTGACGCGGTTCAAGGCAAGGTGACCTTGCGTTTGCAGGATGTGCCCTGGGACCAGGCGTTGGATCTG
GTACTGCGCAGCAAGGGCCTGGAGCAGCGCAAGGACGGCAATGTGCTGCTGGTCGCACCGCGTGCCGAGCTGGCCGGTTC
AGCGCCGTCGCGGCGCGAGCTGATCCCGATCCATCATGCCAAGGCCGCCGATATCGCCGAGTTGTTCCACGCCCTGATGG
CCTATGAGGCCGGGGGCGCCAGCCACGGTTCGCTGAGTGTCGACGAGCGCACCAATACCCTGGTCGCCAGCCAGCCGCCA
GAGCGTCTGGAAGAGCTGCGCAGGCTGATCGGCGAACTGGATGTACCGGTTCGTCAGGTGATGATCGAGGCGCGGATTGT
CGAGGCCAATGTCGATTTCGAAAAGGCCCTGGGGGTGCGTTGGGGTGGCGCCGTGCAGGTGGGCAAGGGTTTGAGCCTCG
GCAGCGCCGATACCTTTGTCGATCTTGGCGTGGATCGGGCCGCGTCCAGCATCGGCGTGGGCCTGGTGCGCAACAACGTA
CTGCTCGACCTGGAGCTCAGCGCCATGGAAAAGACCGGCAATGGCGAGATCATCTCCCAGCCCAAGGTGGTTACCGCCGA
CAAGGAAACCGCGCGGATCCTCAAGGGCACCGAGGTGCCGTATCAGGAAACCAGCGGCAGCGGCGCCACGTCCGTGACCT
TCCGTGAGGCATCGCTGTCTCTGGAGGTGACCCCGCAGATCACCCCGGACAACCGGGTGATCATGGCGGTCAAGGTGACC
AAGGACGAGCCCGACTACCTCAATGCCCTTGATCACGTGCCGGCGATCCGCAAGAACGAGGTCAACGCCAAGGTGCGCAT
AAATGATGGCGAGACCATCGTGATCGGCGGCGTGTACTCGACGGTGCAAAGTAAAGTTGTCGACAAGGTGCCATTTTTCG
GCGATGTGCCGTATGTTGGGCGGCTGTTTCGTCGCGATGTTCTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTGACT
CCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA
ATGGGCAAGGGAGGTGTTATTGCAGCGCTGATAGGGGGCTGTCTGTTTGCCGGCGTCGTTGCGGGGAAGCAGCTGTATGG
TGGCGAGCCGCTGTCGCTTAATTTCCAGGATGTCGAGGTACGTACGGTATTGCAGGTGCTGGCCGACTTTTCCGGGGTCA
ACCTGGTGGCCAGTGACGCGGTTCAAGGCAAGGTGACCTTGCGTTTGCAGGATGTGCCCTGGGACCAGGCGTTGGATCTG
GTACTGCGCAGCAAGGGCCTGGAGCAGCGCAAGGACGGCAATGTGCTGCTGGTCGCACCGCGTGCCGAGCTGGCCGGTTC
AGCGCCGTCGCGGCGCGAGCTGATCCCGATCCATCATGCCAAGGCCGCCGATATCGCCGAGTTGTTCCACGCCCTGATGG
CCTATGAGGCCGGGGGCGCCAGCCACGGTTCGCTGAGTGTCGACGAGCGCACCAATACCCTGGTCGCCAGCCAGCCGCCA
GAGCGTCTGGAAGAGCTGCGCAGGCTGATCGGCGAACTGGATGTACCGGTTCGTCAGGTGATGATCGAGGCGCGGATTGT
CGAGGCCAATGTCGATTTCGAAAAGGCCCTGGGGGTGCGTTGGGGTGGCGCCGTGCAGGTGGGCAAGGGTTTGAGCCTCG
GCAGCGCCGATACCTTTGTCGATCTTGGCGTGGATCGGGCCGCGTCCAGCATCGGCGTGGGCCTGGTGCGCAACAACGTA
CTGCTCGACCTGGAGCTCAGCGCCATGGAAAAGACCGGCAATGGCGAGATCATCTCCCAGCCCAAGGTGGTTACCGCCGA
CAAGGAAACCGCGCGGATCCTCAAGGGCACCGAGGTGCCGTATCAGGAAACCAGCGGCAGCGGCGCCACGTCCGTGACCT
TCCGTGAGGCATCGCTGTCTCTGGAGGTGACCCCGCAGATCACCCCGGACAACCGGGTGATCATGGCGGTCAAGGTGACC
AAGGACGAGCCCGACTACCTCAATGCCCTTGATCACGTGCCGGCGATCCGCAAGAACGAGGTCAACGCCAAGGTGCGCAT
AAATGATGGCGAGACCATCGTGATCGGCGGCGTGTACTCGACGGTGCAAAGTAAAGTTGTCGACAAGGTGCCATTTTTCG
GCGATGTGCCGTATGTTGGGCGGCTGTTTCGTCGCGATGTTCTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTGACT
CCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilQ | Pseudomonas aeruginosa PAK |
60.321 |
100 |
0.637 |
| comQ | Acinetobacter baylyi ADP1 |
42.762 |
100 |
0.465 |
| pilQ | Acinetobacter baumannii D1279779 |
40.741 |
100 |
0.453 |
| pilQ | Acinetobacter baumannii strain A118 |
40.741 |
100 |
0.453 |
| pilQ | Legionella pneumophila strain Lp02 |
43.23 |
100 |
0.441 |
| pilQ | Legionella pneumophila strain ERS1305867 |
43.23 |
100 |
0.441 |
| pilQ | Vibrio campbellii strain DS40M4 |
42.191 |
100 |
0.438 |
| pilQ | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.584 |
100 |
0.431 |
| pilQ | Vibrio cholerae strain A1552 |
42.584 |
100 |
0.431 |
| pilQ | Neisseria meningitidis MC58 |
36.49 |
100 |
0.383 |
| pilQ | Neisseria meningitidis M1080 |
36.534 |
100 |
0.378 |
| pilQ | Neisseria gonorrhoeae strain FA1090 |
36.3 |
100 |
0.375 |