Detailed information NTG0516682

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: I6I32_RS08415
• Genome accession: NZ_CP066041
• Coordinates: 1748359..1748829 (+)
• Length: 156 a.a.
• NCBI ID: WP_000609595.1
• Uniprot ID: A0A125YWP2
• Organism: Streptococcus oralis strain FDAARGOS_1075
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1743359..1753829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I32_RS08385 (I6I32_08385)	-	1743543..1744091 (-)	549	WP_198464496.1	NADPH-dependent FMN reductase	-
I6I32_RS08390 (I6I32_08390)	-	1744183..1744629 (-)	447	WP_198464497.1	MarR family winged helix-turn-helix transcriptional regulator	-
I6I32_RS08395 (I6I32_08395)	-	1744748..1745224 (+)	477	WP_000776858.1	DUF5590 domain-containing protein	-
I6I32_RS08400 (I6I32_08400)	-	1745234..1746412 (+)	1179	WP_198464498.1	pyridoxal phosphate-dependent aminotransferase	-
I6I32_RS08405 (I6I32_08405)	asnS	1746565..1747908 (+)	1344	WP_416069188.1	asparagine--tRNA ligase	-
I6I32_RS08410 (I6I32_08410)	rpsF	1748057..1748347 (+)	291	WP_198464499.1	30S ribosomal protein S6	-
I6I32_RS08415 (I6I32_08415)	ssbA	1748359..1748829 (+)	471	WP_000609595.1	single-stranded DNA-binding protein SsbA	Machinery gene
I6I32_RS08420 (I6I32_08420)	rpsR	1748861..1749100 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
I6I32_RS08425 (I6I32_08425)	-	1749310..1749819 (+)	510	WP_198464500.1	GNAT family N-acetyltransferase	-
I6I32_RS08430 (I6I32_08430)	wecB	1750257..1751405 (+)	1149	WP_198464501.1	non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase	-
I6I32_RS08435 (I6I32_08435)	-	1751412..1752191 (+)	780	WP_198464502.1	hypothetical protein	-
I6I32_RS08440 (I6I32_08440)	-	1752334..1753644 (+)	1311	WP_198464503.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17182.08 Da
• Isoelectric Point: 5.2065

>NTDB_id=516682 I6I32_RS08415 WP_000609595.1 1748359..1748829(+) (ssbA) [Streptococcus oralis strain FDAARGOS_1075]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHSGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=516682 I6I32_RS08415 WP_000609595.1 1748359..1748829(+) (ssbA) [Streptococcus oralis strain FDAARGOS_1075]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTACGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGCGAAGGACATTCAGGTGGAGCTTATTCTGCACCAACTGCTGGCCAATCAGCACCTGCAAATCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTCGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A125YWP2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	52.841	100	0.596
ssb	Neisseria gonorrhoeae MS11	34.286	100	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae R6	49.573	75	0.372
ssbB/cilA	Streptococcus mitis SK321	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae D39	49.573	75	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	49.573	75	0.372
ssb	Neisseria meningitidis MC58	33.143	100	0.372
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	67.949	0.372