Detailed information NTG0516491

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: I6H77_RS07005
• Genome accession: NZ_CP066021
• Coordinates: 1450177..1450647 (+)
• Length: 156 a.a.
• NCBI ID: WP_000609595.1
• Uniprot ID: A0A125YWP2
• Organism: Streptococcus oralis strain FDAARGOS_1020
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1445177..1455647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H77_RS06975 (I6H77_06975)	-	1445361..1445909 (-)	549	WP_000039627.1	NADPH-dependent FMN reductase	-
I6H77_RS06980 (I6H77_06980)	-	1446001..1446447 (-)	447	WP_000816316.1	MarR family winged helix-turn-helix transcriptional regulator	-
I6H77_RS06985 (I6H77_06985)	-	1446566..1447042 (+)	477	WP_000776857.1	DUF5590 domain-containing protein	-
I6H77_RS06990 (I6H77_06990)	-	1447052..1448230 (+)	1179	WP_000777434.1	pyridoxal phosphate-dependent aminotransferase	-
I6H77_RS06995 (I6H77_06995)	asnS	1448383..1449726 (+)	1344	WP_000167133.1	asparagine--tRNA ligase	-
I6H77_RS07000 (I6H77_07000)	rpsF	1449875..1450165 (+)	291	WP_001151782.1	30S ribosomal protein S6	-
I6H77_RS07005 (I6H77_07005)	ssbA	1450177..1450647 (+)	471	WP_000609595.1	single-stranded DNA-binding protein SsbA	Machinery gene
I6H77_RS07010 (I6H77_07010)	rpsR	1450679..1450918 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
I6H77_RS07015 (I6H77_07015)	-	1451228..1451737 (+)	510	WP_002875475.1	GNAT family N-acetyltransferase	-
I6H77_RS07020 (I6H77_07020)	wecB	1452176..1453324 (+)	1149	WP_000734440.1	non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase	-
I6H77_RS07025 (I6H77_07025)	-	1453331..1454110 (+)	780	WP_000800619.1	hypothetical protein	-
I6H77_RS07030 (I6H77_07030)	-	1454253..1455563 (+)	1311	WP_000625486.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17182.08 Da
• Isoelectric Point: 5.2065

>NTDB_id=516491 I6H77_RS07005 WP_000609595.1 1450177..1450647(+) (ssbA) [Streptococcus oralis strain FDAARGOS_1020]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHSGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=516491 I6H77_RS07005 WP_000609595.1 1450177..1450647(+) (ssbA) [Streptococcus oralis strain FDAARGOS_1020]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTGG
AGTGCGCGAAGGACATTCAGGTGGAGCTTATTCTGCACCAACTGCTGGCCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTTGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A125YWP2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	52.841	100	0.596
ssb	Neisseria gonorrhoeae MS11	34.286	100	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae R6	49.573	75	0.372
ssbB/cilA	Streptococcus mitis SK321	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae D39	49.573	75	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	49.573	75	0.372
ssb	Neisseria meningitidis MC58	33.143	100	0.372
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	67.949	0.372