Detailed information
Bioinformatically predicted
Overview
| Name | pilQ | Type | Machinery gene |
| Locus tag | IM733_RS20950 | Genome accession | NZ_CP063832 |
| Coordinates | 4721503..4722747 (+) | Length | 414 a.a. |
| NCBI ID | WP_248918317.1 | Uniprot ID | - |
| Organism | Pseudomonas entomophila strain 23S | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4716503..4727747
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IM733_RS20930 | - | 4716512..4718965 (-) | 2454 | WP_248921213.1 | penicillin-binding protein 1A | - |
| IM733_RS20935 | pilM | 4719134..4720009 (+) | 876 | WP_283107510.1 | pilus assembly protein PilM | - |
| IM733_RS20940 | - | 4720006..4720545 (+) | 540 | WP_248918315.1 | PilN domain-containing protein | - |
| IM733_RS20945 | - | 4720611..4721543 (+) | 933 | WP_248918316.1 | pilus assembly protein PilP | - |
| IM733_RS20950 | pilQ | 4721503..4722747 (+) | 1245 | WP_248918317.1 | secretin N-terminal domain-containing protein | Machinery gene |
| IM733_RS20955 | aroK | 4722752..4723270 (+) | 519 | WP_248918318.1 | shikimate kinase AroK | - |
| IM733_RS20960 | aroB | 4723368..4724465 (+) | 1098 | WP_248918319.1 | 3-dehydroquinate synthase | - |
| IM733_RS20965 | - | 4724481..4726100 (+) | 1620 | WP_248918320.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 414 a.a. Molecular weight: 45057.65 Da Isoelectric Point: 4.7452
>NTDB_id=496998 IM733_RS20950 WP_248918317.1 4721503..4722747(+) (pilQ) [Pseudomonas entomophila strain 23S]
MLVLLGARAALAAEFQGESMSLNFQDVEVRAVLQVMADYAGINLVASDAVQGRITLRLEEVPWDQALDLVLRSKGLGRRQ
EGNVLLVAPIAELAEQSRGAHLEQALDARLEPLQRELIPVYHAKASDLSELLLASLADDGILAGRGSLSVDARTNTLVVA
QPADRMGEIRRLVAQLDVPVRQVMIEARIVEANIDYEKALGVRWGGPLYGRDSQLGSELFVDMGVERATSALGVGLLRSD
ILLDLELSAMEKSGNGEIISQPRVVTADKETARILKGTEVPYQETTKSGATSISFREASLSLEVTPQITPDGKVIMAVRV
TKDEPDFVNALNNVPPIRKNEVNAKVRVTDGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFL
TPRIMSDQAIAVSR
MLVLLGARAALAAEFQGESMSLNFQDVEVRAVLQVMADYAGINLVASDAVQGRITLRLEEVPWDQALDLVLRSKGLGRRQ
EGNVLLVAPIAELAEQSRGAHLEQALDARLEPLQRELIPVYHAKASDLSELLLASLADDGILAGRGSLSVDARTNTLVVA
QPADRMGEIRRLVAQLDVPVRQVMIEARIVEANIDYEKALGVRWGGPLYGRDSQLGSELFVDMGVERATSALGVGLLRSD
ILLDLELSAMEKSGNGEIISQPRVVTADKETARILKGTEVPYQETTKSGATSISFREASLSLEVTPQITPDGKVIMAVRV
TKDEPDFVNALNNVPPIRKNEVNAKVRVTDGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFL
TPRIMSDQAIAVSR
Nucleotide
Download Length: 1245 bp
>NTDB_id=496998 IM733_RS20950 WP_248918317.1 4721503..4722747(+) (pilQ) [Pseudomonas entomophila strain 23S]
ATGTTGGTGCTGCTGGGCGCACGGGCAGCGCTGGCGGCTGAGTTTCAGGGCGAATCGATGTCGCTGAACTTCCAGGATGT
GGAAGTGCGTGCGGTATTGCAGGTAATGGCCGACTACGCCGGTATAAACCTGGTGGCCAGCGATGCCGTCCAGGGGCGAA
TCACCCTCAGGCTGGAGGAAGTGCCCTGGGATCAGGCGCTCGATCTTGTGTTGCGTAGCAAGGGGCTGGGGCGTCGACAA
GAGGGGAATGTGCTGTTGGTAGCGCCCATTGCCGAACTCGCCGAGCAGTCGCGGGGTGCTCACCTGGAGCAGGCGCTGGA
TGCTCGACTCGAACCGTTGCAACGGGAGCTGATCCCGGTCTATCACGCAAAAGCGTCTGACCTGTCCGAACTGCTGCTGG
CGAGTCTGGCCGACGACGGCATCCTGGCCGGGCGCGGTAGCCTGAGCGTGGATGCACGCACCAATACGCTGGTGGTTGCC
CAGCCCGCCGACCGGATGGGTGAAATCCGGCGATTGGTGGCCCAGCTTGATGTGCCTGTGCGCCAGGTCATGATCGAGGC
GCGTATCGTCGAGGCCAATATCGATTACGAAAAGGCTCTGGGTGTGCGCTGGGGTGGCCCGCTGTACGGTCGTGACAGCC
AGCTGGGCAGCGAACTGTTCGTCGATATGGGGGTGGAACGGGCGACGTCGGCGCTTGGGGTCGGGCTGCTACGCAGTGAC
ATCCTGCTTGACCTCGAGCTCAGCGCGATGGAGAAAAGCGGCAATGGCGAGATCATCTCCCAGCCCAGGGTGGTCACCGC
CGACAAGGAGACGGCGCGAATTCTCAAGGGAACCGAGGTCCCCTACCAGGAGACCACCAAGAGCGGTGCCACCTCCATCT
CGTTTCGCGAAGCCTCCCTGTCGTTGGAGGTGACGCCGCAGATCACCCCGGACGGCAAGGTGATCATGGCGGTGCGGGTG
ACCAAGGACGAGCCGGACTTCGTCAATGCCCTGAACAATGTGCCTCCCATTCGCAAGAACGAGGTCAACGCCAAGGTGCG
GGTCACCGATGGCGAAACCATTGTGATTGGTGGCGTGTACTCGACGTCGCAGAACAATGTGGTCGACAAGGTGCCATTTT
TCGGCGATCTGCCGTATGTTGGGCGGCTGTTTCGACGCGATGCATTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTG
ACTCCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA
ATGTTGGTGCTGCTGGGCGCACGGGCAGCGCTGGCGGCTGAGTTTCAGGGCGAATCGATGTCGCTGAACTTCCAGGATGT
GGAAGTGCGTGCGGTATTGCAGGTAATGGCCGACTACGCCGGTATAAACCTGGTGGCCAGCGATGCCGTCCAGGGGCGAA
TCACCCTCAGGCTGGAGGAAGTGCCCTGGGATCAGGCGCTCGATCTTGTGTTGCGTAGCAAGGGGCTGGGGCGTCGACAA
GAGGGGAATGTGCTGTTGGTAGCGCCCATTGCCGAACTCGCCGAGCAGTCGCGGGGTGCTCACCTGGAGCAGGCGCTGGA
TGCTCGACTCGAACCGTTGCAACGGGAGCTGATCCCGGTCTATCACGCAAAAGCGTCTGACCTGTCCGAACTGCTGCTGG
CGAGTCTGGCCGACGACGGCATCCTGGCCGGGCGCGGTAGCCTGAGCGTGGATGCACGCACCAATACGCTGGTGGTTGCC
CAGCCCGCCGACCGGATGGGTGAAATCCGGCGATTGGTGGCCCAGCTTGATGTGCCTGTGCGCCAGGTCATGATCGAGGC
GCGTATCGTCGAGGCCAATATCGATTACGAAAAGGCTCTGGGTGTGCGCTGGGGTGGCCCGCTGTACGGTCGTGACAGCC
AGCTGGGCAGCGAACTGTTCGTCGATATGGGGGTGGAACGGGCGACGTCGGCGCTTGGGGTCGGGCTGCTACGCAGTGAC
ATCCTGCTTGACCTCGAGCTCAGCGCGATGGAGAAAAGCGGCAATGGCGAGATCATCTCCCAGCCCAGGGTGGTCACCGC
CGACAAGGAGACGGCGCGAATTCTCAAGGGAACCGAGGTCCCCTACCAGGAGACCACCAAGAGCGGTGCCACCTCCATCT
CGTTTCGCGAAGCCTCCCTGTCGTTGGAGGTGACGCCGCAGATCACCCCGGACGGCAAGGTGATCATGGCGGTGCGGGTG
ACCAAGGACGAGCCGGACTTCGTCAATGCCCTGAACAATGTGCCTCCCATTCGCAAGAACGAGGTCAACGCCAAGGTGCG
GGTCACCGATGGCGAAACCATTGTGATTGGTGGCGTGTACTCGACGTCGCAGAACAATGTGGTCGACAAGGTGCCATTTT
TCGGCGATCTGCCGTATGTTGGGCGGCTGTTTCGACGCGATGCATTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTG
ACTCCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilQ | Pseudomonas aeruginosa PAK |
58.028 |
100 |
0.611 |
| comQ | Acinetobacter baylyi ADP1 |
43.556 |
100 |
0.473 |
| pilQ | Acinetobacter baumannii strain A118 |
42.048 |
100 |
0.466 |
| pilQ | Acinetobacter baumannii D1279779 |
42.048 |
100 |
0.466 |
| pilQ | Vibrio campbellii strain DS40M4 |
42.453 |
100 |
0.435 |
| pilQ | Legionella pneumophila strain ERS1305867 |
43.062 |
100 |
0.435 |
| pilQ | Legionella pneumophila strain Lp02 |
43.062 |
100 |
0.435 |
| pilQ | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.388 |
100 |
0.418 |
| pilQ | Vibrio cholerae strain A1552 |
41.388 |
100 |
0.418 |
| pilQ | Neisseria gonorrhoeae strain FA1090 |
37.709 |
100 |
0.382 |
| pilQ | Neisseria meningitidis M1080 |
36.516 |
100 |
0.37 |
| pilQ | Neisseria meningitidis MC58 |
36.516 |
100 |
0.37 |