Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | KCG38_RS27250 | Genome accession | NZ_CP073080 |
| Coordinates | 5819280..5819744 (-) | Length | 154 a.a. |
| NCBI ID | WP_211851992.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain NDTH9845 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5814280..5824744
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KCG38_RS27235 (KCG38_27235) | nadC | 5816780..5817628 (+) | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| KCG38_RS27245 (KCG38_27245) | - | 5817809..5819122 (-) | 1314 | WP_223697243.1 | O-antigen ligase family protein | - |
| KCG38_RS27250 (KCG38_27250) | pilA/pilAI | 5819280..5819744 (-) | 465 | WP_211851992.1 | pilin | Machinery gene |
| KCG38_RS27255 (KCG38_27255) | pilB | 5819975..5821675 (+) | 1701 | WP_003107297.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| KCG38_RS27260 (KCG38_27260) | pilC | 5821679..5822896 (+) | 1218 | WP_003161763.1 | type II secretion system F family protein | Machinery gene |
| KCG38_RS27265 (KCG38_27265) | pilD | 5822897..5823769 (+) | 873 | WP_023084740.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| KCG38_RS27270 (KCG38_27270) | coaE | 5823766..5824377 (+) | 612 | WP_003112838.1 | dephospho-CoA kinase | - |
| KCG38_RS27275 (KCG38_27275) | yacG | 5824374..5824574 (+) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16160.52 Da Isoelectric Point: 8.9986
>NTDB_id=486614 KCG38_RS27250 WP_211851992.1 5819280..5819744(-) (pilA/pilAI) [Pseudomonas aeruginosa strain NDTH9845]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWICGITGSPTNWKANYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWICGITGSPTNWKANYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=486614 KCG38_RS27250 WP_211851992.1 5819280..5819744(-) (pilA/pilAI) [Pseudomonas aeruginosa strain NDTH9845]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGATCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGATCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.516 |
100 |
0.448 |
| pilA | Acinetobacter baumannii strain A118 |
42.208 |
100 |
0.422 |
| pilA | Pseudomonas aeruginosa PAK |
41.139 |
100 |
0.422 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.471 |
100 |
0.403 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
38.411 |
98.052 |
0.377 |
| pilA | Vibrio cholerae C6706 |
38.411 |
98.052 |
0.377 |
| pilA | Vibrio cholerae strain A1552 |
38.411 |
98.052 |
0.377 |