Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | H1A19_RS07070 | Genome accession | NZ_CP059383 |
| Coordinates | 1349807..1350253 (-) | Length | 148 a.a. |
| NCBI ID | WP_000609563.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain BJ01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1344807..1355253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1A19_RS07015 (H1A19_07015) | - | 1345396..1345830 (-) | 435 | WP_000142566.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| H1A19_RS07020 (H1A19_07020) | - | 1346218..1346484 (-) | 267 | WP_000660741.1 | hypothetical protein | - |
| H1A19_RS07025 (H1A19_07025) | - | 1346481..1346990 (-) | 510 | WP_001019144.1 | DUF1642 domain-containing protein | - |
| H1A19_RS07030 (H1A19_07030) | - | 1347005..1347169 (-) | 165 | WP_000864960.1 | hypothetical protein | - |
| H1A19_RS07035 (H1A19_07035) | - | 1347159..1347323 (-) | 165 | WP_017645326.1 | hypothetical protein | - |
| H1A19_RS07040 (H1A19_07040) | - | 1347325..1347648 (-) | 324 | WP_000052300.1 | hypothetical protein | - |
| H1A19_RS07045 (H1A19_07045) | - | 1347651..1348136 (-) | 486 | WP_001280064.1 | class I SAM-dependent methyltransferase | - |
| H1A19_RS07050 (H1A19_07050) | - | 1348260..1348667 (-) | 408 | WP_000612386.1 | YopX family protein | - |
| H1A19_RS07055 (H1A19_07055) | - | 1348651..1348938 (-) | 288 | WP_050198474.1 | nucleotide modification associated domain-containing protein | - |
| H1A19_RS07060 (H1A19_07060) | - | 1348950..1349291 (-) | 342 | WP_181576320.1 | hypothetical protein | - |
| H1A19_RS07065 (H1A19_07065) | - | 1349278..1349793 (-) | 516 | WP_001061210.1 | hypothetical protein | - |
| H1A19_RS07070 (H1A19_07070) | ssbA | 1349807..1350253 (-) | 447 | WP_000609563.1 | single-stranded DNA-binding protein | Machinery gene |
| H1A19_RS07075 (H1A19_07075) | - | 1350246..1350920 (-) | 675 | WP_001231959.1 | ERF family protein | - |
| H1A19_RS07080 (H1A19_07080) | - | 1350921..1351403 (-) | 483 | WP_000323860.1 | siphovirus Gp157 family protein | - |
| H1A19_RS07085 (H1A19_07085) | - | 1351424..1351678 (-) | 255 | WP_000229419.1 | hypothetical protein | - |
| H1A19_RS07090 (H1A19_07090) | - | 1351665..1351940 (-) | 276 | WP_000431581.1 | hypothetical protein | - |
| H1A19_RS07095 (H1A19_07095) | - | 1351930..1352076 (-) | 147 | WP_000424124.1 | hypothetical protein | - |
| H1A19_RS07100 (H1A19_07100) | - | 1352067..1352849 (-) | 783 | WP_000172066.1 | ATP-binding protein | - |
| H1A19_RS07105 (H1A19_07105) | - | 1352836..1353552 (-) | 717 | WP_000079052.1 | DnaD domain-containing protein | - |
| H1A19_RS07110 (H1A19_07110) | - | 1353590..1353727 (-) | 138 | WP_017645329.1 | hypothetical protein | - |
| H1A19_RS07115 (H1A19_07115) | - | 1353742..1354020 (-) | 279 | WP_001162679.1 | MerR family transcriptional regulator | - |
| H1A19_RS07120 (H1A19_07120) | - | 1354101..1354277 (-) | 177 | WP_017645330.1 | hypothetical protein | - |
| H1A19_RS07125 (H1A19_07125) | - | 1354343..1355194 (-) | 852 | WP_001261509.1 | ParB N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 16313.84 Da Isoelectric Point: 4.7729
>NTDB_id=469215 H1A19_RS07070 WP_000609563.1 1349807..1350253(-) (ssbA) [Streptococcus agalactiae strain BJ01]
MINNVVLIGRLTAAPDLRKTPSNVSALQGTLAVNRNFKNQNGEREADFINFQAWRNTADIIAAYCGKGSLIGITGRIQTR
NYENQQGQRVYVTEVVADSVTLLESRNNQQGGQQNQDNSFQNGNNSNGYQSPFGNSNPMDISDDDLPF
MINNVVLIGRLTAAPDLRKTPSNVSALQGTLAVNRNFKNQNGEREADFINFQAWRNTADIIAAYCGKGSLIGITGRIQTR
NYENQQGQRVYVTEVVADSVTLLESRNNQQGGQQNQDNSFQNGNNSNGYQSPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 447 bp
>NTDB_id=469215 H1A19_RS07070 WP_000609563.1 1349807..1350253(-) (ssbA) [Streptococcus agalactiae strain BJ01]
ATGATTAACAACGTTGTACTGATTGGAAGACTGACAGCAGCTCCTGACCTACGCAAGACCCCTAGCAATGTTTCGGCATT
ACAGGGCACACTTGCTGTAAATCGTAATTTTAAGAACCAAAACGGAGAGCGTGAGGCTGATTTTATCAACTTTCAAGCAT
GGCGCAACACGGCTGATATTATCGCTGCGTATTGTGGTAAAGGCTCTCTAATCGGCATTACAGGGCGTATTCAAACCCGC
AACTATGAAAATCAACAAGGTCAGCGTGTTTACGTCACGGAAGTAGTTGCTGATAGCGTAACTCTCCTTGAGAGTCGCAA
CAATCAGCAAGGTGGACAACAAAACCAAGATAACTCTTTCCAAAATGGAAACAATTCAAATGGCTATCAGTCGCCTTTCG
GGAATTCAAATCCTATGGACATCTCAGACGATGACTTGCCTTTCTAA
ATGATTAACAACGTTGTACTGATTGGAAGACTGACAGCAGCTCCTGACCTACGCAAGACCCCTAGCAATGTTTCGGCATT
ACAGGGCACACTTGCTGTAAATCGTAATTTTAAGAACCAAAACGGAGAGCGTGAGGCTGATTTTATCAACTTTCAAGCAT
GGCGCAACACGGCTGATATTATCGCTGCGTATTGTGGTAAAGGCTCTCTAATCGGCATTACAGGGCGTATTCAAACCCGC
AACTATGAAAATCAACAAGGTCAGCGTGTTTACGTCACGGAAGTAGTTGCTGATAGCGTAACTCTCCTTGAGAGTCGCAA
CAATCAGCAAGGTGGACAACAAAACCAAGATAACTCTTTCCAAAATGGAAACAATTCAAATGGCTATCAGTCGCCTTTCG
GGAATTCAAATCCTATGGACATCTCAGACGATGACTTGCCTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.778 |
100 |
0.581 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
49.412 |
100 |
0.568 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
57.547 |
71.622 |
0.412 |
| ssbA | Streptococcus mutans UA159 |
40.541 |
100 |
0.405 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
52.679 |
75.676 |
0.399 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
51.887 |
71.622 |
0.372 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
51.429 |
70.946 |
0.365 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
50.943 |
71.622 |
0.365 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
50.943 |
71.622 |
0.365 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
50.943 |
71.622 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
50.943 |
71.622 |
0.365 |
| ssbB/cilA | Streptococcus mitis SK321 |
50.943 |
71.622 |
0.365 |