Detailed information NTG0443476

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: HKM25_RS10330
• Genome accession: NZ_CP053210
• Coordinates: 2009325..2009729 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 6A-10
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2004325..2014729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKM25_RS10295 (HKM25_2108)	rnpA	2004740..2005111 (-)	372	WP_000739246.1	ribonuclease P protein component	-
HKM25_RS11980 (HKM25_2109)	-	2005128..2005259 (-)	132	WP_000768904.1	hypothetical protein	-
HKM25_RS10300 (HKM25_2110)	-	2005260..2006450 (-)	1191	WP_054362660.1	acetate kinase	-
HKM25_RS10305 (HKM25_2111)	comYH	2006501..2007454 (-)	954	WP_000345121.1	class I SAM-dependent methyltransferase	Machinery gene
HKM25_RS10310	-	2007515..2008108 (-)	594	Protein_2026	methyltransferase domain-containing protein	-
HKM25_RS10315 (HKM25_2114)	comGG/cglG	2008245..2008658 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
HKM25_RS10320 (HKM25_2115)	comGF/cglF	2008636..2009097 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
HKM25_RS10325 (HKM25_2116)	comGE/cglE	2009060..2009362 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
HKM25_RS10330 (HKM25_2117)	comGD/cglD	2009325..2009729 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
HKM25_RS10335 (HKM25_2118)	comGC/cglC	2009722..2010048 (-)	327	WP_000738635.1	comG operon protein ComGC	Machinery gene
HKM25_RS10340 (HKM25_2119)	comGB/cglB	2010050..2011066 (-)	1017	WP_078151629.1	competence type IV pilus assembly protein ComGB	Machinery gene
HKM25_RS10345 (HKM25_2120)	comGA/cglA/cilD	2011014..2011955 (-)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
HKM25_RS10350 (HKM25_2121)	-	2012031..2012396 (-)	366	WP_000286415.1	DUF1033 family protein	-
HKM25_RS10355 (HKM25_2122)	-	2012547..2013605 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=443476 HKM25_RS10330 WP_000588005.1 2009325..2009729(-) (comGD/cglD) [Streptococcus pneumoniae strain 6A-10]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=443476 HKM25_RS10330 WP_000588005.1 2009325..2009729(-) (comGD/cglD) [Streptococcus pneumoniae strain 6A-10]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478