Detailed information
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | HKM25_RS10315 | Genome accession | NZ_CP053210 |
| Coordinates | 2008245..2008658 (-) | Length | 137 a.a. |
| NCBI ID | WP_000265630.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain 6A-10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2003245..2013658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKM25_RS10290 (HKM25_2107) | - | 2003941..2004765 (-) | 825 | WP_000727904.1 | membrane protein insertase YidC | - |
| HKM25_RS10295 (HKM25_2108) | rnpA | 2004740..2005111 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| HKM25_RS11980 (HKM25_2109) | - | 2005128..2005259 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| HKM25_RS10300 (HKM25_2110) | - | 2005260..2006450 (-) | 1191 | WP_054362660.1 | acetate kinase | - |
| HKM25_RS10305 (HKM25_2111) | comYH | 2006501..2007454 (-) | 954 | WP_000345121.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HKM25_RS10310 | - | 2007515..2008108 (-) | 594 | Protein_2026 | methyltransferase domain-containing protein | - |
| HKM25_RS10315 (HKM25_2114) | comGG/cglG | 2008245..2008658 (-) | 414 | WP_000265630.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| HKM25_RS10320 (HKM25_2115) | comGF/cglF | 2008636..2009097 (-) | 462 | WP_000250545.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HKM25_RS10325 (HKM25_2116) | comGE/cglE | 2009060..2009362 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HKM25_RS10330 (HKM25_2117) | comGD/cglD | 2009325..2009729 (-) | 405 | WP_000588005.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HKM25_RS10335 (HKM25_2118) | comGC/cglC | 2009722..2010048 (-) | 327 | WP_000738635.1 | comG operon protein ComGC | Machinery gene |
| HKM25_RS10340 (HKM25_2119) | comGB/cglB | 2010050..2011066 (-) | 1017 | WP_078151629.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HKM25_RS10345 (HKM25_2120) | comGA/cglA/cilD | 2011014..2011955 (-) | 942 | WP_000249555.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HKM25_RS10350 (HKM25_2121) | - | 2012031..2012396 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| HKM25_RS10355 (HKM25_2122) | - | 2012547..2013605 (-) | 1059 | WP_000649466.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15892.29 Da Isoelectric Point: 10.1695
>NTDB_id=443473 HKM25_RS10315 WP_000265630.1 2008245..2008658(-) (comGG/cglG) [Streptococcus pneumoniae strain 6A-10]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TSLVTTVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKAEKKKSEEKPEKKENS
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TSLVTTVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKAEKKKSEEKPEKKENS
Nucleotide
Download Length: 414 bp
>NTDB_id=443473 HKM25_RS10315 WP_000265630.1 2008245..2008658(-) (comGG/cglG) [Streptococcus pneumoniae strain 6A-10]
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACTGATTCAAGCGAAAAAGCGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACTGATTCAAGCGAAAAAGCGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus mitis SK321 |
86.861 |
100 |
0.869 |
| comGG/cglG | Streptococcus pneumoniae Rx1 |
95.726 |
85.401 |
0.818 |
| comGG/cglG | Streptococcus pneumoniae D39 |
95.726 |
85.401 |
0.818 |
| comGG/cglG | Streptococcus pneumoniae R6 |
95.726 |
85.401 |
0.818 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
95.726 |
85.401 |
0.818 |
| comGG/cglG | Streptococcus mitis NCTC 12261 |
90.984 |
89.051 |
0.81 |
| comYG | Streptococcus mutans UA140 |
40.299 |
97.81 |
0.394 |
| comYG | Streptococcus mutans UA159 |
40.299 |
97.81 |
0.394 |