Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   HIR77_RS17890 Genome accession   NZ_CP053102
Coordinates   3369023..3369922 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3364023..3374922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIR77_RS17855 (HIR77_17890) mrpE 3364263..3364739 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  HIR77_RS17860 (HIR77_17895) mrpF 3364739..3365023 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  HIR77_RS17865 (HIR77_17900) mnhG 3365007..3365381 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  HIR77_RS17870 (HIR77_17905) yuxO 3365420..3365800 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  HIR77_RS17875 (HIR77_17910) comA 3365819..3366463 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  HIR77_RS17880 (HIR77_17915) comP 3366544..3368853 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  HIR77_RS17885 (HIR77_17920) comX 3368868..3369035 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  HIR77_RS17890 (HIR77_17925) comQ 3369023..3369922 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  HIR77_RS17895 (HIR77_17930) degQ 3370107..3370247 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  HIR77_RS17900 (HIR77_17935) - 3370469..3370594 (+) 126 WP_003228793.1 hypothetical protein -
  HIR77_RS17905 (HIR77_17940) - 3370708..3371076 (+) 369 WP_003243784.1 hypothetical protein -
  HIR77_RS17910 (HIR77_17945) pdeH 3371052..3372281 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  HIR77_RS17915 (HIR77_17950) pncB 3372418..3373890 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  HIR77_RS17920 (HIR77_17955) pncA 3373906..3374457 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=443126 HIR77_RS17890 WP_003243039.1 3369023..3369922(-) (comQ) [Bacillus subtilis subsp. subtilis str. 168]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=443126 HIR77_RS17890 WP_003243039.1 3369023..3369922(-) (comQ) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1