Detailed information NTG0443035

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: HLB22_RS07735
• Genome accession: NZ_CP053101
• Coordinates: 1617987..1618298 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain EDCC5398
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1612987..1623298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HLB22_RS07700 (HLB22_07700)	gcvPA	1613489..1614835 (-)	1347	WP_000019688.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
HLB22_RS07705 (HLB22_07705)	gcvT	1614855..1615946 (-)	1092	WP_000093355.1	glycine cleavage system aminomethyltransferase GcvT	-
HLB22_RS07710 (HLB22_07710)	-	1616105..1616629 (-)	525	WP_001015122.1	shikimate kinase	-
HLB22_RS07715 (HLB22_07715)	-	1616619..1616765 (-)	147	WP_001789879.1	hypothetical protein	-
HLB22_RS07720 (HLB22_07720)	comGF	1616862..1617359 (-)	498	WP_029697681.1	competence type IV pilus minor pilin ComGF	Machinery gene
HLB22_RS07725 (HLB22_07725)	comGE	1617277..1617576 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
HLB22_RS07730 (HLB22_07730)	comGD	1617563..1618009 (-)	447	WP_075583651.1	competence type IV pilus minor pilin ComGD	Machinery gene
HLB22_RS07735 (HLB22_07735)	comGC	1617987..1618298 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
HLB22_RS07740 (HLB22_07740)	comGB	1618312..1619382 (-)	1071	WP_000776403.1	competence type IV pilus assembly protein ComGB	Machinery gene
HLB22_RS07745 (HLB22_07745)	comGA	1619354..1620328 (-)	975	WP_000697215.1	competence type IV pilus ATPase ComGA	Machinery gene
HLB22_RS07750 (HLB22_07750)	-	1620380..1621003 (-)	624	WP_001223006.1	MBL fold metallo-hydrolase	-
HLB22_RS07755 (HLB22_07755)	-	1621000..1621329 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
HLB22_RS07760 (HLB22_07760)	-	1621329..1622315 (-)	987	WP_000161315.1	ROK family glucokinase	-
HLB22_RS07765 (HLB22_07765)	-	1622312..1622515 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=443035 HLB22_RS07735 WP_000472256.1 1617987..1618298(-) (comGC) [Staphylococcus aureus strain EDCC5398]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=443035 HLB22_RS07735 WP_000472256.1 1617987..1618298(-) (comGC) [Staphylococcus aureus strain EDCC5398]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369