Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HLB22_RS07725 | Genome accession | NZ_CP053101 |
| Coordinates | 1617277..1617576 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain EDCC5398 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1612277..1622576
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLB22_RS07700 (HLB22_07700) | gcvPA | 1613489..1614835 (-) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| HLB22_RS07705 (HLB22_07705) | gcvT | 1614855..1615946 (-) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HLB22_RS07710 (HLB22_07710) | - | 1616105..1616629 (-) | 525 | WP_001015122.1 | shikimate kinase | - |
| HLB22_RS07715 (HLB22_07715) | - | 1616619..1616765 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| HLB22_RS07720 (HLB22_07720) | comGF | 1616862..1617359 (-) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HLB22_RS07725 (HLB22_07725) | comGE | 1617277..1617576 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| HLB22_RS07730 (HLB22_07730) | comGD | 1617563..1618009 (-) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HLB22_RS07735 (HLB22_07735) | comGC | 1617987..1618298 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HLB22_RS07740 (HLB22_07740) | comGB | 1618312..1619382 (-) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HLB22_RS07745 (HLB22_07745) | comGA | 1619354..1620328 (-) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HLB22_RS07750 (HLB22_07750) | - | 1620380..1621003 (-) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| HLB22_RS07755 (HLB22_07755) | - | 1621000..1621329 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| HLB22_RS07760 (HLB22_07760) | - | 1621329..1622315 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| HLB22_RS07765 (HLB22_07765) | - | 1622312..1622515 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=443033 HLB22_RS07725 WP_000844413.1 1617277..1617576(-) (comGE) [Staphylococcus aureus strain EDCC5398]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=443033 HLB22_RS07725 WP_000844413.1 1617277..1617576(-) (comGE) [Staphylococcus aureus strain EDCC5398]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |