Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DB356_RS02360 Genome accession   NZ_CP053030
Coordinates   512437..512847 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas congelans strain 508     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 507437..517847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DB356_RS02330 (DB356_02560) - 507438..508442 (-) 1005 WP_003366142.1 aspartate carbamoyltransferase catalytic subunit -
  DB356_RS02335 (DB356_02565) pyrR 508455..508967 (-) 513 WP_003366144.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DB356_RS02340 (DB356_02570) ruvX 509066..509506 (-) 441 WP_010440037.1 Holliday junction resolvase RuvX -
  DB356_RS02345 (DB356_02575) - 509506..510078 (-) 573 WP_214348811.1 YqgE/AlgH family protein -
  DB356_RS02350 (DB356_02580) - 510154..511056 (-) 903 WP_025991169.1 energy transducer TonB -
  DB356_RS02355 (DB356_02585) gshB 511223..512182 (-) 960 WP_003316740.1 glutathione synthase -
  DB356_RS02360 (DB356_02590) pilG 512437..512847 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  DB356_RS02365 (DB356_02595) pilH 512894..513259 (+) 366 WP_003316741.1 twitching motility response regulator PilH -
  DB356_RS02370 (DB356_02600) - 513274..513813 (+) 540 WP_003316742.1 chemotaxis protein CheW -
  DB356_RS02375 (DB356_02605) - 513864..515906 (+) 2043 WP_010440052.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=442286 DB356_RS02360 WP_002551738.1 512437..512847(+) (pilG) [Pseudomonas congelans strain 508]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=442286 DB356_RS02360 WP_002551738.1 512437..512847(+) (pilG) [Pseudomonas congelans strain 508]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGTGCGATCAAGGCTCATGTGCCGGGCTTCGTAGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691