Detailed information NTG0430557

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: HA248_RS09320
• Genome accession: NZ_CP050175
• Coordinates: 1800656..1801051 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701590
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1795656..1806051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HA248_RS09295 (HA248_09275)	-	1796007..1796339 (-)	333	WP_033705125.1	helix-turn-helix transcriptional regulator	-
HA248_RS09300 (HA248_09280)	-	1796352..1797125 (-)	774	WP_033705126.1	class I SAM-dependent methyltransferase	-
HA248_RS09305 (HA248_09285)	-	1797571..1798326 (-)	756	Protein_1814	epoxyqueuosine reductase QueH	-
HA248_RS09310 (HA248_09290)	groL	1798464..1800086 (-)	1623	WP_000031573.1	chaperonin GroEL	-
HA248_RS09315 (HA248_09295)	groES	1800102..1800386 (-)	285	WP_000917330.1	co-chaperone GroES	-
HA248_RS09320 (HA248_09300)	ssbB/cilA	1800656..1801051 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
HA248_RS09325 (HA248_09305)	-	1801129..1801890 (-)	762	WP_166735729.1	SDR family NAD(P)-dependent oxidoreductase	-
HA248_RS09330 (HA248_09310)	ytpR	1801932..1802558 (-)	627	WP_033705129.1	YtpR family tRNA-binding protein	-
HA248_RS09335 (HA248_09315)	-	1802574..1802891 (-)	318	WP_000615769.1	thioredoxin family protein	-
HA248_RS09340 (HA248_09320)	-	1802888..1803187 (-)	300	WP_001864089.1	DUF4651 domain-containing protein	-
HA248_RS11600	-	1803385..1803465 (-)	81	WP_223200442.1	hypothetical protein	-
HA248_RS09345 (HA248_09325)	-	1803472..1803663 (-)	192	WP_000122504.1	hypothetical protein	-
HA248_RS09350 (HA248_09330)	-	1803825..1804499 (-)	675	WP_033705130.1	membrane protein	-
HA248_RS09355 (HA248_09335)	-	1804504..1804950 (-)	447	WP_000776596.1	LytTR family DNA-binding domain-containing protein	-
HA248_RS09360 (HA248_09340)	-	1805064..1805567 (-)	504	WP_000800928.1	phosphatase PAP2 family protein	-
HA248_RS09365 (HA248_09345)	-	1805564..1805926 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=430557 HA248_RS09320 WP_000282442.1 1800656..1801051(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701590]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=430557 HA248_RS09320 WP_000282442.1 1800656..1801051(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701590]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366