Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | E3T16_RS02385 | Genome accession | NZ_CP047777 |
| Coordinates | 445682..445993 (+) | Length | 103 a.a. |
| NCBI ID | WP_160177506.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1632 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 440682..450993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T16_RS02355 (E3T16_02355) | - | 441465..441668 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3T16_RS02360 (E3T16_02360) | - | 441665..442651 (+) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| E3T16_RS02365 (E3T16_02365) | - | 442651..442980 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3T16_RS02370 (E3T16_02370) | - | 442977..443600 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3T16_RS02375 (E3T16_02375) | comGA | 443652..444626 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3T16_RS02380 (E3T16_02380) | comGB | 444598..445668 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3T16_RS02385 (E3T16_02385) | comGC | 445682..445993 (+) | 312 | WP_160177506.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3T16_RS02390 (E3T16_02390) | comGD | 445971..446417 (+) | 447 | WP_160177508.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3T16_RS02395 (E3T16_02395) | comGE | 446404..446703 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| E3T16_RS02400 (E3T16_02400) | comGF | 446621..447118 (+) | 498 | WP_029650985.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3T16_RS02405 (E3T16_02405) | - | 447215..447361 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| E3T16_RS02410 (E3T16_02410) | - | 447351..447875 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| E3T16_RS02415 (E3T16_02415) | gcvT | 448034..449125 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3T16_RS02420 (E3T16_02420) | gcvPA | 449145..450491 (+) | 1347 | WP_160177510.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11401.45 Da Isoelectric Point: 7.8600
>NTDB_id=415747 E3T16_RS02385 WP_160177506.1 445682..445993(+) (comGC) [Staphylococcus aureus strain UP_1632]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQLKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNEEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQLKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNEEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=415747 E3T16_RS02385 WP_160177506.1 445682..445993(+) (comGC) [Staphylococcus aureus strain UP_1632]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGTTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGAAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGTTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGAAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
98.058 |
100 |
0.981 |
| comGC | Staphylococcus aureus N315 |
98.058 |
100 |
0.981 |
| comGC/cglC | Streptococcus mitis SK321 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
48.837 |
83.495 |
0.408 |
| comGC/cglC | Streptococcus pneumoniae R6 |
48.837 |
83.495 |
0.408 |
| comGC/cglC | Streptococcus pneumoniae D39 |
48.837 |
83.495 |
0.408 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
48.837 |
83.495 |
0.408 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.837 |
95.146 |
0.398 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
41.489 |
91.262 |
0.379 |
| comYC | Streptococcus suis isolate S10 |
48.718 |
75.728 |
0.369 |