Detailed information NTG0404966

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: GOM47_RS00930
• Genome accession: NZ_CP046524
• Coordinates: 171561..172022 (+)
• Length: 153 a.a.
• NCBI ID: WP_235080781.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOT
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 166561..177022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM47_RS00895 (GOM47_00895)	nagA	166974..168125 (+)	1152	WP_001134447.1	N-acetylglucosamine-6-phosphate deacetylase	-
GOM47_RS00900 (GOM47_00900)	-	168271..168636 (+)	366	WP_000286396.1	DUF1033 family protein	-
GOM47_RS00905 (GOM47_00905)	comGA/cglA/cilD	168706..169647 (+)	942	WP_235080777.1	competence type IV pilus ATPase ComGA	Machinery gene
GOM47_RS00910 (GOM47_00910)	comGB/cglB	169595..170611 (+)	1017	WP_235081262.1	competence type IV pilus assembly protein ComGB	Machinery gene
GOM47_RS00915 (GOM47_00915)	comGC/cglC	170613..170936 (+)	324	WP_235080778.1	competence type IV pilus major pilin ComGC	Machinery gene
GOM47_RS00920 (GOM47_00920)	comGD/cglD	170899..171333 (+)	435	WP_235080779.1	competence type IV pilus minor pilin ComGD	Machinery gene
GOM47_RS00925 (GOM47_00925)	comGE/cglE	171296..171598 (+)	303	WP_235080780.1	competence type IV pilus minor pilin ComGE	Machinery gene
GOM47_RS00930 (GOM47_00930)	comGF/cglF	171561..172022 (+)	462	WP_235080781.1	competence type IV pilus minor pilin ComGF	Machinery gene
GOM47_RS00935 (GOM47_00935)	comGG/cglG	172000..172413 (+)	414	WP_235080782.1	competence type IV pilus minor pilin ComGG	Machinery gene
GOM47_RS00940 (GOM47_00940)	-	172446..173036 (+)	591	WP_235080783.1	class I SAM-dependent methyltransferase	-
GOM47_RS00945 (GOM47_00945)	comYH	173095..174048 (+)	954	WP_235080784.1	class I SAM-dependent methyltransferase	Machinery gene
GOM47_RS00950 (GOM47_00950)	-	174098..175288 (+)	1191	WP_235080785.1	acetate kinase	-
GOM47_RS00955 (GOM47_00955)	rnpA	175448..175819 (+)	372	WP_000748124.1	ribonuclease P protein component	-
GOM47_RS00960 (GOM47_00960)	-	175794..176606 (+)	813	WP_000728094.1	YidC/Oxa1 family membrane protein insertase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17823.51 Da
• Isoelectric Point: 9.6236

>NTDB_id=404966 GOM47_RS00930 WP_235080781.1 171561..172022(+) (comGF/cglF) [Streptococcus oralis strain SOT]
MVQRSCSTLKSSKVRAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQQQREQKEWLLFVDQLEAELERSQFEKVEGN
RIYMKQDGKEIAIGKSKSEDFRKTDSSGRGYQPMVYGLKSAQITEENQLVRFHFQFQKGLEREFIYRVEKAKS

Nucleotide

• Length: 462 bp

>NTDB_id=404966 GOM47_RS00930 WP_235080781.1 171561..172022(+) (comGF/cglF) [Streptococcus oralis strain SOT]
ATGGTTCAGAGAAGTTGCTCGACCTTAAAGAGCAGTAAGGTAAGAGCTTTCACTCTTTTAGAATCTCTGATTGCCCTTAT
CGTCATTAGCGGAGGCTTGCTCCTCTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAGCAAAGAG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAGCTGGAGGCGGAGTTAGAGCGTTCGCAGTTCGAAAAGGTGGAAGGCAAT
CGTATTTATATGAAGCAGGATGGCAAGGAAATTGCGATAGGCAAGTCTAAATCGGAAGATTTTCGAAAAACCGATAGCAG
TGGACGAGGCTACCAACCTATGGTTTATGGATTGAAATCAGCACAAATCACAGAGGAAAATCAACTGGTTCGCTTTCACT
TCCAATTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	90.196	100	0.902
comGF/cglF	Streptococcus mitis SK321	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae Rx1	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae D39	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae R6	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae TIGR4	86.928	100	0.869