Detailed information NTG0404964

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: GOM47_RS00920
• Genome accession: NZ_CP046524
• Coordinates: 170899..171333 (+)
• Length: 144 a.a.
• NCBI ID: WP_235080779.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOT
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 165899..176333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM47_RS00895 (GOM47_00895)	nagA	166974..168125 (+)	1152	WP_001134447.1	N-acetylglucosamine-6-phosphate deacetylase	-
GOM47_RS00900 (GOM47_00900)	-	168271..168636 (+)	366	WP_000286396.1	DUF1033 family protein	-
GOM47_RS00905 (GOM47_00905)	comGA/cglA/cilD	168706..169647 (+)	942	WP_235080777.1	competence type IV pilus ATPase ComGA	Machinery gene
GOM47_RS00910 (GOM47_00910)	comGB/cglB	169595..170611 (+)	1017	WP_235081262.1	competence type IV pilus assembly protein ComGB	Machinery gene
GOM47_RS00915 (GOM47_00915)	comGC/cglC	170613..170936 (+)	324	WP_235080778.1	competence type IV pilus major pilin ComGC	Machinery gene
GOM47_RS00920 (GOM47_00920)	comGD/cglD	170899..171333 (+)	435	WP_235080779.1	competence type IV pilus minor pilin ComGD	Machinery gene
GOM47_RS00925 (GOM47_00925)	comGE/cglE	171296..171598 (+)	303	WP_235080780.1	competence type IV pilus minor pilin ComGE	Machinery gene
GOM47_RS00930 (GOM47_00930)	comGF/cglF	171561..172022 (+)	462	WP_235080781.1	competence type IV pilus minor pilin ComGF	Machinery gene
GOM47_RS00935 (GOM47_00935)	comGG/cglG	172000..172413 (+)	414	WP_235080782.1	competence type IV pilus minor pilin ComGG	Machinery gene
GOM47_RS00940 (GOM47_00940)	-	172446..173036 (+)	591	WP_235080783.1	class I SAM-dependent methyltransferase	-
GOM47_RS00945 (GOM47_00945)	comYH	173095..174048 (+)	954	WP_235080784.1	class I SAM-dependent methyltransferase	Machinery gene
GOM47_RS00950 (GOM47_00950)	-	174098..175288 (+)	1191	WP_235080785.1	acetate kinase	-
GOM47_RS00955 (GOM47_00955)	rnpA	175448..175819 (+)	372	WP_000748124.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16071.61 Da
• Isoelectric Point: 10.7821

>NTDB_id=404964 GOM47_RS00920 WP_235080779.1 170899..171333(+) (comGD/cglD) [Streptococcus oralis strain SOT]
MRNKKQVRLLQIKAFTMFESLLVLGLVSIIALALSSSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLEGQT
ISNGSQKLIVPKGIQAPSGQTIHFDRAGGNRSLAKVEFQTSKGAISYRLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=404964 GOM47_RS00920 WP_235080779.1 170899..171333(+) (comGD/cglD) [Streptococcus oralis strain SOT]
ATGCGAAACAAAAAACAAGTCAGACTGTTGCAGATTAAGGCCTTTACCATGTTTGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCATTGCTTTGGCTTTGTCAAGCTCAGTCCAGTCTAGTTTTGCTGCGGTTGAGGAGCAGATTTTCTTTATGGAAT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTGTTGCTAGTCAGCAAAAGACCAGCTTGAATTTAGAGGGACAGACC
ATTAGCAATGGCAGTCAAAAATTAATCGTTCCCAAAGGAATTCAAGCACCATCAGGACAGACGATTCACTTTGACCGAGC
TGGTGGGAATAGATCTCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCAATCAGCTATCGATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAAGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	86.806	100	0.868
comGD/cglD	Streptococcus mitis SK321	89.474	92.361	0.826
comGD/cglD	Streptococcus pneumoniae TIGR4	89.474	92.361	0.826
comGD/cglD	Streptococcus pneumoniae Rx1	89.474	92.361	0.826
comGD/cglD	Streptococcus pneumoniae D39	89.474	92.361	0.826
comGD/cglD	Streptococcus pneumoniae R6	89.474	92.361	0.826
comYD	Streptococcus gordonii str. Challis substr. CH1	55.797	95.833	0.535
comYD	Streptococcus mutans UA140	47.287	89.583	0.424
comYD	Streptococcus mutans UA159	47.287	89.583	0.424