Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | GCS73_RS06645 | Genome accession | NZ_CP045308 |
| Coordinates | 1441544..1441978 (-) | Length | 144 a.a. |
| NCBI ID | WP_003632053.1 | Uniprot ID | D3HRR3 |
| Organism | Legionella longbeachae strain B41211CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1436544..1446978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCS73_RS06620 (GCS73_06550) | tsaB | 1437569..1438219 (+) | 651 | WP_003632058.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| GCS73_RS06625 (GCS73_06555) | - | 1438229..1438420 (+) | 192 | WP_012979013.1 | Trm112 family protein | - |
| GCS73_RS06630 (GCS73_06560) | - | 1438699..1439235 (+) | 537 | Protein_1230 | IS5 family transposase | - |
| GCS73_RS06635 (GCS73_06570) | - | 1439408..1440808 (-) | 1401 | WP_003632056.1 | APC family permease | - |
| GCS73_RS06640 (GCS73_06575) | - | 1441139..1441462 (-) | 324 | WP_003632054.1 | BolA family protein | - |
| GCS73_RS06645 (GCS73_06580) | pilA2 | 1441544..1441978 (-) | 435 | WP_003632053.1 | pilin | Machinery gene |
| GCS73_RS06650 (GCS73_06585) | - | 1442271..1443515 (-) | 1245 | WP_003632052.1 | 6-phosphofructokinase | - |
| GCS73_RS06655 (GCS73_06590) | letS | 1443556..1446288 (-) | 2733 | WP_012979015.1 | two-component system sensor histidine kinase LetS | Regulator |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14827.97 Da Isoelectric Point: 8.4860
>NTDB_id=393350 GCS73_RS06645 WP_003632053.1 1441544..1441978(-) (pilA2) [Legionella longbeachae strain B41211CHC]
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
Nucleotide
Download Length: 435 bp
>NTDB_id=393350 GCS73_RS06645 WP_003632053.1 1441544..1441978(-) (pilA2) [Legionella longbeachae strain B41211CHC]
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
57.143 |
100 |
0.583 |
| pilA2 | Legionella pneumophila str. Paris |
57.143 |
100 |
0.583 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
52.229 |
100 |
0.569 |
| comP | Acinetobacter baylyi ADP1 |
47.945 |
100 |
0.486 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.415 |
100 |
0.438 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
42.029 |
95.833 |
0.403 |
| pilE | Neisseria gonorrhoeae MS11 |
36.25 |
100 |
0.403 |
| pilA | Pseudomonas aeruginosa PAK |
35.185 |
100 |
0.396 |
| pilA | Acinetobacter baumannii strain A118 |
38.194 |
100 |
0.382 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.806 |
100 |
0.368 |