Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | GCB94_RS07375 | Genome accession | NZ_CP045306 |
| Coordinates | 1444401..1444835 (-) | Length | 144 a.a. |
| NCBI ID | WP_003632053.1 | Uniprot ID | D3HRR3 |
| Organism | Legionella longbeachae strain B1445CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1439401..1449835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCB94_RS07350 (GCB94_07315) | tsaB | 1440426..1441076 (+) | 651 | WP_003632058.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| GCB94_RS07355 (GCB94_07320) | - | 1441086..1441277 (+) | 192 | WP_012979013.1 | Trm112 family protein | - |
| GCB94_RS07360 (GCB94_07325) | - | 1441556..1442089 (+) | 534 | Protein_1228 | IS5 family transposase | - |
| GCB94_RS07365 (GCB94_07335) | - | 1442265..1443665 (-) | 1401 | WP_003632056.1 | APC family permease | - |
| GCB94_RS07370 (GCB94_07340) | - | 1443996..1444319 (-) | 324 | WP_003632054.1 | BolA family protein | - |
| GCB94_RS07375 (GCB94_07345) | pilA2 | 1444401..1444835 (-) | 435 | WP_003632053.1 | pilin | Machinery gene |
| GCB94_RS07380 (GCB94_07350) | - | 1445128..1446372 (-) | 1245 | WP_003632052.1 | 6-phosphofructokinase | - |
| GCB94_RS07385 (GCB94_07355) | letS | 1446413..1449148 (-) | 2736 | WP_085956275.1 | response regulator | Regulator |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14827.97 Da Isoelectric Point: 8.4860
>NTDB_id=393313 GCB94_RS07375 WP_003632053.1 1444401..1444835(-) (pilA2) [Legionella longbeachae strain B1445CHC]
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
Nucleotide
Download Length: 435 bp
>NTDB_id=393313 GCB94_RS07375 WP_003632053.1 1444401..1444835(-) (pilA2) [Legionella longbeachae strain B1445CHC]
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
57.143 |
100 |
0.583 |
| pilA2 | Legionella pneumophila str. Paris |
57.143 |
100 |
0.583 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
52.229 |
100 |
0.569 |
| comP | Acinetobacter baylyi ADP1 |
47.945 |
100 |
0.486 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.415 |
100 |
0.438 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
42.029 |
95.833 |
0.403 |
| pilE | Neisseria gonorrhoeae MS11 |
36.25 |
100 |
0.403 |
| pilA | Pseudomonas aeruginosa PAK |
35.185 |
100 |
0.396 |
| pilA | Acinetobacter baumannii strain A118 |
38.194 |
100 |
0.382 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.806 |
100 |
0.368 |