Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | F8M43_RS18995 | Genome accession | NZ_CP044498 |
| Coordinates | 3646767..3647108 (-) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis strain ms-2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3641767..3652108
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F8M43_RS18980 | hepAB | 3642008..3644776 (+) | 2769 | WP_038427969.1 | DEAD/DEAH box helicase | - |
| F8M43_RS18985 | ywpJ | 3644904..3645761 (-) | 858 | WP_038427970.1 | phosphatase YwpJ | - |
| F8M43_RS18990 | glcR | 3645767..3646543 (-) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| F8M43_RS18995 | ssbB | 3646767..3647108 (-) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| F8M43_RS19000 | ywpG | 3647185..3647568 (-) | 384 | WP_015714843.1 | DynA interaction protein YwpG | - |
| F8M43_RS19005 | ywpF | 3647743..3648153 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| F8M43_RS19010 | - | 3648293..3648685 (-) | 393 | Protein_3671 | class A sortase | - |
| F8M43_RS19015 | ywpD | 3648945..3649781 (+) | 837 | WP_038428160.1 | histidine kinase | - |
| F8M43_RS19020 | mscL | 3649828..3650223 (-) | 396 | WP_021445844.1 | large conductance mechanosensitive channel protein MscL | - |
| F8M43_RS19025 | fabZ | 3650296..3650721 (-) | 426 | WP_003221796.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| F8M43_RS19030 | rapD | 3650913..3651977 (+) | 1065 | WP_015714847.1 | aspartate phosphatase RapD | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=390593 F8M43_RS18995 WP_014478203.1 3646767..3647108(-) (ssbB) [Bacillus subtilis strain ms-2]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=390593 F8M43_RS18995 WP_014478203.1 3646767..3647108(-) (ssbB) [Bacillus subtilis strain ms-2]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |