Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   FSA28_RS09065 Genome accession   NZ_CP044495
Coordinates   1800506..1801258 (-) Length   250 a.a.
NCBI ID   WP_002262114.1    Uniprot ID   Q8DS93
Organism   Streptococcus mutans strain UA140     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1795506..1806258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS09030 (FSA28_1570) - 1796133..1796276 (-) 144 WP_002263740.1 hypothetical protein -
  FSA28_RS09040 (FSA28_1571) - 1796567..1797589 (-) 1023 WP_002351359.1 thioredoxin family protein -
  FSA28_RS09045 (FSA28_1572) - 1798071..1798259 (-) 189 WP_002284747.1 Blp family class II bacteriocin -
  FSA28_RS09050 (FSA28_1573) - 1798423..1798636 (-) 214 Protein_1682 Blp family class II bacteriocin -
  FSA28_RS09055 (FSA28_1574) comC/blpC 1798902..1799042 (+) 141 WP_002270250.1 ComC/BlpC family leader-containing pheromone/bacteriocin Regulator
  FSA28_RS09060 (FSA28_1575) comD/blpH 1799184..1800509 (-) 1326 WP_002292008.1 GHKL domain-containing protein Regulator
  FSA28_RS09065 (FSA28_1576) comE/blpR 1800506..1801258 (-) 753 WP_002262114.1 response regulator transcription factor Regulator
  FSA28_RS09070 (FSA28_1577) - 1801730..1802368 (-) 639 WP_002292006.1 VTT domain-containing protein -
  FSA28_RS09075 (FSA28_1578) - 1802416..1803042 (-) 627 WP_002268642.1 hypothetical protein -
  FSA28_RS09080 (FSA28_1579) der 1803117..1804427 (-) 1311 WP_002292004.1 ribosome biogenesis GTPase Der -
  FSA28_RS09085 (FSA28_1580) dnaI 1804440..1805339 (-) 900 WP_088741878.1 primosomal protein DnaI -

Sequence


Protein


Download         Length: 250 a.a.        Molecular weight: 29358.71 Da        Isoelectric Point: 8.2551

>NTDB_id=390460 FSA28_RS09065 WP_002262114.1 1800506..1801258(-) (comE/blpR) [Streptococcus mutans strain UA140]
MISIFVLEDDFLQQGRLETTIAAIMKEKNWSYKELTIFGKPQQLIDAIPEKGNHQIFFLDIEIKKEEKKGLEVANQIRQH
NPSAVIVFVTTHSEFMPLTFQYQVSALDFIDKSLNPEEFSHRIESALYYAMENSQKNGQSEELFIFHSSETQFQVPFAEI
LYFETSSTAHKLCLYTYDERIEFYGSMTDIVKMDKRLFQCHRSFIVNPANITRIDRKKRLAYFRNNKSCLISRTKLTKLR
AVIADQRRAK

Nucleotide


Download         Length: 753 bp        

>NTDB_id=390460 FSA28_RS09065 WP_002262114.1 1800506..1801258(-) (comE/blpR) [Streptococcus mutans strain UA140]
ATGATTTCTATTTTTGTATTGGAAGATGATTTTTTACAACAAGGACGTCTTGAAACCACCATTGCAGCTATCATGAAAGA
AAAAAATTGGTCTTATAAAGAATTGACTATTTTTGGAAAACCACAACAACTTATTGACGCTATCCCTGAAAAGGGCAATC
ACCAGATTTTCTTTTTGGATATTGAAATCAAAAAAGAGGAAAAGAAAGGACTGGAAGTAGCCAATCAGATTAGACAGCAT
AATCCTAGTGCAGTTATTGTCTTTGTCACGACACATTCTGAGTTTATGCCCCTCACTTTTCAGTATCAGGTATCTGCTTT
GGATTTTATTGATAAATCTTTGAATCCTGAGGAGTTCTCCCACCGCATTGAATCAGCGCTGTATTATGCTATGGAAAACA
GCCAGAAGAATGGTCAATCAGAGGAACTTTTTATTTTCCATTCATCTGAAACTCAGTTTCAGGTCCCTTTTGCTGAGATT
CTGTATTTTGAAACATCTTCAACAGCCCATAAGCTCTGCCTTTATACTTATGATGAACGGATTGAATTCTACGGCAGTAT
GACTGACATTGTTAAAATGGATAAGAGACTTTTTCAGTGCCATCGCTCTTTTATTGTCAATCCTGCCAATATTACCCGTA
TTGATCGGAAAAAACGCTTGGCCTATTTTCGAAATAATAAGTCTTGTCTTATTTCACGAACTAAGTTAACAAAACTGAGA
GCTGTGATTGCTGATCAAAGGAGAGCAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DS93

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

100

100

1

  comE/comE1 Streptococcus equinus JB1

46.888

96.4

0.452

  comE Streptococcus mitis NCTC 12261

41.7

98.8

0.412

  comE Streptococcus infantis strain Atu-4

41.7

98.8

0.412

  comE Streptococcus pneumoniae D39

41.296

98.8

0.408

  comE Streptococcus pneumoniae Rx1

41.296

98.8

0.408

  comE Streptococcus pneumoniae R6

41.296

98.8

0.408

  comE Streptococcus pneumoniae TIGR4

41.296

98.8

0.408

  comE Streptococcus mitis SK321

41.296

98.8

0.408

  comE/comE2 Streptococcus equinus JB1

40.664

96.4

0.392

  comE/comE1 Streptococcus gordonii str. Challis substr. CH1

37.551

98

0.368

  comE/comE2 Streptococcus gordonii strain NCTC7865

37.551

98

0.368


Multiple sequence alignment