Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   FSA28_RS09060 Genome accession   NZ_CP044495
Coordinates   1799184..1800509 (-) Length   441 a.a.
NCBI ID   WP_002292008.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1794184..1805509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS09025 (FSA28_1569) - 1794857..1795871 (+) 1015 Protein_1678 HlyD family efflux transporter periplasmic adaptor subunit -
  FSA28_RS09030 (FSA28_1570) - 1796133..1796276 (-) 144 WP_002263740.1 hypothetical protein -
  FSA28_RS09040 (FSA28_1571) - 1796567..1797589 (-) 1023 WP_002351359.1 thioredoxin family protein -
  FSA28_RS09045 (FSA28_1572) - 1798071..1798259 (-) 189 WP_002284747.1 Blp family class II bacteriocin -
  FSA28_RS09050 (FSA28_1573) - 1798423..1798636 (-) 214 Protein_1682 Blp family class II bacteriocin -
  FSA28_RS09055 (FSA28_1574) comC/blpC 1798902..1799042 (+) 141 WP_002270250.1 ComC/BlpC family leader-containing pheromone/bacteriocin Regulator
  FSA28_RS09060 (FSA28_1575) comD/blpH 1799184..1800509 (-) 1326 WP_002292008.1 GHKL domain-containing protein Regulator
  FSA28_RS09065 (FSA28_1576) comE/blpR 1800506..1801258 (-) 753 WP_002262114.1 response regulator transcription factor Regulator
  FSA28_RS09070 (FSA28_1577) - 1801730..1802368 (-) 639 WP_002292006.1 VTT domain-containing protein -
  FSA28_RS09075 (FSA28_1578) - 1802416..1803042 (-) 627 WP_002268642.1 hypothetical protein -
  FSA28_RS09080 (FSA28_1579) der 1803117..1804427 (-) 1311 WP_002292004.1 ribosome biogenesis GTPase Der -
  FSA28_RS09085 (FSA28_1580) dnaI 1804440..1805339 (-) 900 WP_088741878.1 primosomal protein DnaI -

Sequence

Protein


Download         Length: 441 a.a.        Molecular weight: 50441.61 Da        Isoelectric Point: 9.8776

>NTDB_id=390459 FSA28_RS09060 WP_002292008.1 1799184..1800509(-) (comD/blpH) [Streptococcus mutans strain UA140]
MNEALMILSNGLLTYLTVLFLLFLFSKVSNVTLSKKELTLFSISNFLIMIAVTMVNVNLFYPAEPLYFIALSIYLNRQNS
LSLNIFYGLLPVASSDLFRRAIIFFILDGTQGIVMGSSIITTYMIEFAGIALSYLFLSVFNVDIGRLKDSLTKMKVKKRL
IPMNITMLLYYLLIQVLYVIESYNVIPTLKFRKFVVIVYLILFLILISFLSQYTKQKVQNEIMAQKEAQIRNITQYSQQI
ESLYKDIRSFRHDYLNILTSLRLGIENKDLASIEKIYHQILEKTGHQLQDTRYNIGHLANIQNDAVKGILSAKILEAQNK
KIAVNVEVSSKIQLPGMELLDFITILSILCDNAIEAAFESLNPEIQLAFFKKNGSIVFIIQNSTKEKQIDVSKIFKENYS
TKGSNRGIGLAKVNHILEHYPKTSLQTSSHHHLFKQLLIIK

Nucleotide


Download         Length: 1326 bp        

>NTDB_id=390459 FSA28_RS09060 WP_002292008.1 1799184..1800509(-) (comD/blpH) [Streptococcus mutans strain UA140]
ATGAATGAAGCCTTAATGATACTTTCAAATGGTTTATTAACTTATCTAACCGTTCTATTTCTCTTGTTTCTATTTTCTAA
GGTAAGTAATGTCACTTTATCGAAAAAGGAATTAACTCTTTTTTCGATAAGCAATTTTCTGATAATGATTGCTGTTACGA
TGGTGAACGTAAACCTGTTTTATCCTGCAGAGCCTCTTTATTTTATAGCTTTATCAATTTATCTTAATAGACAGAATAGT
CTTTCTCTAAATATATTTTATGGTCTGCTGCCTGTTGCCAGTTCTGACTTGTTTAGGCGGGCAATCATATTCTTTATCTT
GGATGGAACTCAAGGAATTGTAATGGGCAGTAGCATTATAACCACCTATATGATCGAGTTTGCAGGAATAGCGCTAAGTT
ACCTCTTTCTCAGTGTGTTCAATGTTGATATTGGTCGACTTAAAGATAGTTTGACCAAGATGAAGGTCAAAAAACGCTTG
ATTCCAATGAATATTACTATGCTTCTATACTACCTTTTAATACAGGTATTGTATGTTATAGAGAGTTATAATGTGATACC
GACTTTAAAATTTCGTAAATTTGTCGTTATTGTCTATCTTATTTTATTTTTGATTCTGATCTCATTTTTAAGCCAATATA
CCAAACAAAAGGTTCAAAATGAGATAATGGCACAAAAGGAAGCTCAGATTCGAAATATCACCCAGTATAGTCAGCAAATA
GAATCTCTTTACAAGGATATTCGAAGTTTCCGCCATGATTATCTGAATATTTTAACTAGCCTCAGATTAGGCATTGAAAA
TAAAGATTTAGCTAGTATTGAAAAGATTTACCATCAAATCTTAGAAAAAACAGGACATCAATTGCAGGATACCCGTTATA
ATATCGGCCATCTAGCTAATATTCAAAACGATGCTGTCAAGGGTATCTTGTCAGCAAAAATCTTAGAAGCTCAGAATAAA
AAGATTGCTGTCAATGTAGAAGTCTCAAGTAAAATACAACTGCCTGGGATGGAGTTGCTTGATTTCATTACTATACTTTC
TATCTTGTGTGATAATGCCATTGAGGCTGCTTTCGAATCATTAAATCCTGAAATTCAGTTAGCCTTTTTTAAGAAAAATG
GCAGCATAGTCTTTATCATTCAGAATTCCACCAAAGAAAAACAAATAGATGTGAGTAAAATTTTTAAAGAAAACTATTCC
ACTAAAGGCTCCAATCGCGGTATTGGTTTAGCAAAGGTGAATCATATTCTTGAACATTATCCCAAAACCAGTTTACAAAC
AAGCAGTCATCATCATTTATTCAAGCAACTCCTAATAATAAAATAG

Domains

Predicted by InterproScan.

GHKL domain (HATPase_c_5)

(337-440)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

99.546

100

0.995

Multiple sequence alignment