Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FTN78_RS00625 | Genome accession | NZ_CP043523 |
| Coordinates | 61455..61880 (+) | Length | 141 a.a. |
| NCBI ID | WP_150890973.1 | Uniprot ID | - |
| Organism | Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 56455..66880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTN78_RS13555 | - | 57251..57415 (+) | 165 | WP_023189648.1 | hypothetical protein | - |
| FTN78_RS13560 (FTN78_chr0066) | - | 57410..57577 (-) | 168 | WP_191904767.1 | hypothetical protein | - |
| FTN78_RS00580 (FTN78_chr0067) | - | 57662..57907 (+) | 246 | WP_080513132.1 | helix-turn-helix transcriptional regulator | - |
| FTN78_RS00585 (FTN78_chr0068) | - | 57919..58665 (+) | 747 | WP_058220422.1 | phage antirepressor | - |
| FTN78_RS00590 (FTN78_chr0069) | - | 58678..58947 (+) | 270 | WP_023164536.1 | hypothetical protein | - |
| FTN78_RS00595 (FTN78_chr0070) | - | 59042..59275 (+) | 234 | WP_095348644.1 | hypothetical protein | - |
| FTN78_RS00600 (FTN78_chr0071) | - | 59230..59508 (-) | 279 | WP_150890965.1 | hypothetical protein | - |
| FTN78_RS00605 (FTN78_chr0072) | - | 59611..59826 (+) | 216 | WP_150890968.1 | DUF1408 domain-containing protein | - |
| FTN78_RS00610 (FTN78_chr0073) | - | 59941..60180 (+) | 240 | WP_209712162.1 | helix-turn-helix transcriptional regulator | - |
| FTN78_RS00615 (FTN78_chr0074) | - | 60177..60695 (+) | 519 | WP_150890969.1 | host-nuclease inhibitor Gam family protein | - |
| FTN78_RS00620 (FTN78_chr0075) | - | 60704..61462 (+) | 759 | WP_150890971.1 | Rad52/Rad22 family DNA repair protein | - |
| FTN78_RS00625 (FTN78_chr0076) | ssb | 61455..61880 (+) | 426 | WP_150890973.1 | single-stranded DNA-binding protein | Machinery gene |
| FTN78_RS00630 (FTN78_chr0077) | - | 62009..62812 (+) | 804 | WP_150890976.1 | phage replisome organizer N-terminal domain-containing protein | - |
| FTN78_RS00635 (FTN78_chr0078) | - | 62822..63712 (+) | 891 | WP_150890978.1 | ATP-binding protein | - |
| FTN78_RS00640 (FTN78_chr0079) | - | 63721..63885 (+) | 165 | WP_150890981.1 | hypothetical protein | - |
| FTN78_RS00645 (FTN78_chr0080) | - | 63875..64285 (+) | 411 | WP_025017293.1 | hypothetical protein | - |
| FTN78_RS00650 (FTN78_chr0081) | - | 64393..64557 (+) | 165 | WP_046124809.1 | hypothetical protein | - |
| FTN78_RS00655 (FTN78_chr0082) | - | 64532..64894 (+) | 363 | WP_150890985.1 | DUF658 family protein | - |
| FTN78_RS00660 (FTN78_chr0083) | - | 65088..65447 (+) | 360 | WP_150890987.1 | hypothetical protein | - |
| FTN78_RS00665 (FTN78_chr0084) | - | 65440..66012 (+) | 573 | WP_150890989.1 | DUF1642 domain-containing protein | - |
| FTN78_RS00670 (FTN78_chr0085) | - | 66009..66428 (+) | 420 | WP_010905698.1 | dUTP diphosphatase | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15678.41 Da Isoelectric Point: 5.2080
>NTDB_id=384760 FTN78_RS00625 WP_150890973.1 61455..61880(+) (ssb) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCVIWGKSAENLANWTHKGQLIGVTGSIQTR
NYENQQGQRIYVTEVIANNFQVLEKSNQANGERVGNPAAKPQNNDSFGNEPIEISDDDLPF
MINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCVIWGKSAENLANWTHKGQLIGVTGSIQTR
NYENQQGQRIYVTEVIANNFQVLEKSNQANGERVGNPAAKPQNNDSFGNEPIEISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=384760 FTN78_RS00625 WP_150890973.1 61455..61880(+) (ssb) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTGAACTTAGATATACACCACAAAATAAAGCAGTTGC
CGCTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCTAATGGAGAAAGAGAAGCCGACTTTATCAATTGTGTTATTT
GGGGTAAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTACTGGTAGTATTCAAACTCGA
AACTATGAGAACCAACAAGGGCAACGAATTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGAGAAAAGTAA
TCAAGCAAATGGTGAACGAGTTGGTAATCCAGCTGCAAAACCACAAAATAACGATTCTTTTGGAAATGAACCAATTGAAA
TTTCAGATGATGACCTACCATTCTAA
ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTGAACTTAGATATACACCACAAAATAAAGCAGTTGC
CGCTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCTAATGGAGAAAGAGAAGCCGACTTTATCAATTGTGTTATTT
GGGGTAAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTACTGGTAGTATTCAAACTCGA
AACTATGAGAACCAACAAGGGCAACGAATTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGAGAAAAGTAA
TCAAGCAAATGGTGAACGAGTTGGTAATCCAGCTGCAAAACCACAAAATAACGATTCTTTTGGAAATGAACCAATTGAAA
TTTCAGATGATGACCTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.706 |
100 |
0.66 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.326 |
100 |
0.638 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.681 |
100 |
0.447 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.681 |
100 |
0.447 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.681 |
100 |
0.447 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.972 |
100 |
0.44 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.692 |
73.759 |
0.426 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
49.515 |
73.05 |
0.362 |