Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | CSPT_RS04060 | Genome accession | NZ_CP043427 |
| Coordinates | 812361..812588 (+) | Length | 75 a.a. |
| NCBI ID | WP_149051351.1 | Uniprot ID | - |
| Organism | Campylobacter sputorum subsp. sputorum strain LMG 7795 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 807361..817588
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSPT_RS04060 (CSPT_0801) | Cj0011c | 812361..812588 (+) | 228 | WP_149051351.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CSPT_RS04065 (CSPT_0802) | - | 812873..813163 (-) | 291 | WP_115616013.1 | hypothetical protein | - |
| CSPT_RS04070 (CSPT_0803) | - | 813879..814235 (+) | 357 | WP_089182421.1 | diacylglycerol kinase | - |
| CSPT_RS09045 | - | 814277..814441 (+) | 165 | WP_170228710.1 | hypothetical protein | - |
| CSPT_RS04075 (CSPT_0804) | cmoB | 814446..815339 (+) | 894 | WP_089182422.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CSPT_RS04080 (CSPT_0805) | - | 815349..815858 (+) | 510 | WP_089182423.1 | hypothetical protein | - |
| CSPT_RS04085 (CSPT_0806) | - | 815855..816448 (-) | 594 | WP_089182424.1 | MBL fold metallo-hydrolase | - |
| CSPT_RS04090 (CSPT_0807) | - | 816582..817334 (+) | 753 | WP_089182425.1 | NAD+ synthase | - |
Sequence
Protein
Download Length: 75 a.a. Molecular weight: 8391.02 Da Isoelectric Point: 9.7671
>NTDB_id=383987 CSPT_RS04060 WP_149051351.1 812361..812588(+) (Cj0011c) [Campylobacter sputorum subsp. sputorum strain LMG 7795]
MKKLLLLLVLVCTYVFGAIDLNTASKDELMTLKGVGESKAEAIIEYRKANKFNSIEDIKKVKGIGDKIYKDNKIV
MKKLLLLLVLVCTYVFGAIDLNTASKDELMTLKGVGESKAEAIIEYRKANKFNSIEDIKKVKGIGDKIYKDNKIV
Nucleotide
Download Length: 228 bp
>NTDB_id=383987 CSPT_RS04060 WP_149051351.1 812361..812588(+) (Cj0011c) [Campylobacter sputorum subsp. sputorum strain LMG 7795]
ATGAAAAAGTTACTTTTATTATTGGTACTTGTTTGTACATATGTATTTGGAGCTATAGATTTAAATACAGCTTCTAAAGA
TGAACTTATGACATTAAAAGGTGTTGGAGAGTCTAAAGCAGAGGCTATCATAGAGTATAGAAAAGCTAATAAATTTAATA
GCATTGAAGACATAAAAAAAGTAAAAGGTATAGGCGATAAGATTTATAAAGATAATAAAATAGTATGA
ATGAAAAAGTTACTTTTATTATTGGTACTTGTTTGTACATATGTATTTGGAGCTATAGATTTAAATACAGCTTCTAAAGA
TGAACTTATGACATTAAAAGGTGTTGGAGAGTCTAAAGCAGAGGCTATCATAGAGTATAGAAAAGCTAATAAATTTAATA
GCATTGAAGACATAAAAAAAGTAAAAGGTATAGGCGATAAGATTTATAAAGATAATAAAATAGTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
55.714 |
93.333 |
0.52 |
| comEA | Acinetobacter baumannii strain A118 |
55.172 |
77.333 |
0.427 |
| comE | Neisseria gonorrhoeae MS11 |
43.662 |
94.667 |
0.413 |
| comE | Neisseria gonorrhoeae MS11 |
43.662 |
94.667 |
0.413 |
| comE | Neisseria gonorrhoeae MS11 |
43.662 |
94.667 |
0.413 |
| comE | Neisseria gonorrhoeae MS11 |
43.662 |
94.667 |
0.413 |
| comEA | Acinetobacter baumannii D1279779 |
53.448 |
77.333 |
0.413 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
54.717 |
70.667 |
0.387 |
| comEA | Acinetobacter baylyi ADP1 |
50 |
74.667 |
0.373 |
| comEA | Vibrio cholerae C6706 |
50 |
74.667 |
0.373 |
| comEA | Vibrio cholerae strain A1552 |
50 |
74.667 |
0.373 |
| comEA | Staphylococcus aureus MW2 |
53.846 |
69.333 |
0.373 |
| comEA | Staphylococcus aureus N315 |
53.846 |
69.333 |
0.373 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
52.83 |
70.667 |
0.373 |