Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | FSZ17_RS21795 | Genome accession | NZ_CP042593 |
| Coordinates | 4604349..4604708 (-) | Length | 119 a.a. |
| NCBI ID | WP_057772908.1 | Uniprot ID | A0A5B8Z9T8 |
| Organism | Cytobacillus dafuensis strain FJAT-25496 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4599349..4609708
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSZ17_RS21780 (FSZ17_21775) | - | 4599572..4601188 (+) | 1617 | WP_057772914.1 | SWIM zinc finger domain-containing protein | - |
| FSZ17_RS21785 (FSZ17_21780) | - | 4601181..4604003 (+) | 2823 | WP_057772912.1 | DEAD/DEAH box helicase | - |
| FSZ17_RS21790 (FSZ17_21785) | - | 4604144..4604344 (-) | 201 | WP_228460253.1 | hypothetical protein | - |
| FSZ17_RS21795 (FSZ17_21790) | ssbB | 4604349..4604708 (-) | 360 | WP_057772908.1 | single-stranded DNA-binding protein | Machinery gene |
| FSZ17_RS21800 (FSZ17_21795) | - | 4605010..4605444 (+) | 435 | WP_057772906.1 | YwpF-like family protein | - |
| FSZ17_RS21805 (FSZ17_21800) | - | 4605509..4605829 (-) | 321 | WP_057772904.1 | hypothetical protein | - |
| FSZ17_RS21810 (FSZ17_21805) | fabZ | 4606105..4606527 (-) | 423 | WP_057772902.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FSZ17_RS21815 (FSZ17_21810) | - | 4607897..4609246 (-) | 1350 | WP_057772898.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 119 a.a. Molecular weight: 13519.30 Da Isoelectric Point: 9.6026
>NTDB_id=378607 FSZ17_RS21795 WP_057772908.1 4604349..4604708(-) (ssbB) [Cytobacillus dafuensis strain FJAT-25496]
MINQVTLVGRLTKDPELKRTPEGTPVTNVTLAVNRHFRNQQGEIGADFVQCTLWKKTAENTSRYCRKGSLIGITGRIQTR
HYDNPEGTRVYVTEVLADSVRFLDQKKQEETWIAAGREA
MINQVTLVGRLTKDPELKRTPEGTPVTNVTLAVNRHFRNQQGEIGADFVQCTLWKKTAENTSRYCRKGSLIGITGRIQTR
HYDNPEGTRVYVTEVLADSVRFLDQKKQEETWIAAGREA
Nucleotide
Download Length: 360 bp
>NTDB_id=378607 FSZ17_RS21795 WP_057772908.1 4604349..4604708(-) (ssbB) [Cytobacillus dafuensis strain FJAT-25496]
ATGATTAATCAAGTAACATTAGTTGGTAGACTGACAAAAGACCCTGAACTAAAAAGAACACCTGAAGGTACTCCCGTAAC
CAATGTAACCCTAGCTGTGAATCGTCACTTCCGCAATCAGCAAGGGGAAATTGGAGCAGACTTTGTCCAATGCACACTTT
GGAAAAAAACCGCGGAAAATACTTCTCGCTATTGCCGAAAGGGCTCATTAATTGGTATCACCGGTCGAATTCAAACGAGA
CATTATGATAATCCAGAAGGCACAAGAGTCTATGTGACCGAAGTACTGGCAGATTCAGTAAGATTTCTTGATCAAAAAAA
GCAAGAAGAAACTTGGATTGCAGCAGGGAGGGAGGCATGA
ATGATTAATCAAGTAACATTAGTTGGTAGACTGACAAAAGACCCTGAACTAAAAAGAACACCTGAAGGTACTCCCGTAAC
CAATGTAACCCTAGCTGTGAATCGTCACTTCCGCAATCAGCAAGGGGAAATTGGAGCAGACTTTGTCCAATGCACACTTT
GGAAAAAAACCGCGGAAAATACTTCTCGCTATTGCCGAAAGGGCTCATTAATTGGTATCACCGGTCGAATTCAAACGAGA
CATTATGATAATCCAGAAGGCACAAGAGTCTATGTGACCGAAGTACTGGCAGATTCAGTAAGATTTCTTGATCAAAAAAA
GCAAGAAGAAACTTGGATTGCAGCAGGGAGGGAGGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
67.273 |
92.437 |
0.622 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.944 |
89.916 |
0.521 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
49.091 |
92.437 |
0.454 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
49.074 |
90.756 |
0.445 |
| ssbA | Streptococcus mutans UA159 |
47.222 |
90.756 |
0.429 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.519 |
90.756 |
0.395 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.519 |
90.756 |
0.395 |
| ssbB/cilA | Streptococcus mitis SK321 |
42.593 |
90.756 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
42.593 |
90.756 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
42.593 |
90.756 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
42.593 |
90.756 |
0.387 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
42.857 |
88.235 |
0.378 |