Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | FCJ76_RS18695 | Genome accession | NZ_CP039935 |
| Coordinates | 3597946..3598287 (-) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis strain H19 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3592946..3603287
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FCJ76_RS18680 | hepAB | 3593187..3595955 (+) | 2769 | WP_033885048.1 | DEAD/DEAH box helicase | - |
| FCJ76_RS18685 | ywpJ | 3596082..3596939 (-) | 858 | WP_015251049.1 | phosphatase YwpJ | - |
| FCJ76_RS18690 | glcR | 3596945..3597721 (-) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| FCJ76_RS18695 | ssbB | 3597946..3598287 (-) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| FCJ76_RS18700 | ywpG | 3598364..3598747 (-) | 384 | WP_014478204.1 | DynA interaction protein YwpG | - |
| FCJ76_RS18705 | ywpF | 3598922..3599332 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| FCJ76_RS18710 | - | 3599473..3600111 (-) | 639 | WP_175405004.1 | class A sortase | - |
| FCJ76_RS18715 | - | 3600209..3601186 (-) | 978 | Protein_3600 | SpaA isopeptide-forming pilin-related protein | - |
| FCJ76_RS18720 | ywpD | 3601220..3602056 (+) | 837 | WP_061891280.1 | histidine kinase | - |
| FCJ76_RS18725 | mscL | 3602103..3602498 (-) | 396 | WP_114523646.1 | large conductance mechanosensitive channel protein MscL | - |
| FCJ76_RS18730 | fabZ | 3602571..3602996 (-) | 426 | WP_003221796.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=361162 FCJ76_RS18695 WP_014478203.1 3597946..3598287(-) (ssbB) [Bacillus subtilis strain H19]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=361162 FCJ76_RS18695 WP_014478203.1 3597946..3598287(-) (ssbB) [Bacillus subtilis strain H19]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGCTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGCTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |