Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FAZ30_RS07105 | Genome accession | NZ_CP039731 |
| Coordinates | 1543247..1543681 (+) | Length | 144 a.a. |
| NCBI ID | WP_124645118.1 | Uniprot ID | - |
| Organism | Aquitalea aquatilis strain THG-DN7.12 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1538247..1548681
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAZ30_RS07085 | proB | 1538408..1539526 (-) | 1119 | WP_103524445.1 | glutamate 5-kinase | - |
| FAZ30_RS07090 | - | 1539593..1541131 (-) | 1539 | WP_124645121.1 | hypothetical protein | - |
| FAZ30_RS07095 | - | 1541258..1542607 (-) | 1350 | WP_124645120.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| FAZ30_RS07100 | pilA2 | 1542797..1543225 (+) | 429 | WP_124645119.1 | pilin | Machinery gene |
| FAZ30_RS07105 | pilA | 1543247..1543681 (+) | 435 | WP_124645118.1 | pilin | Machinery gene |
| FAZ30_RS07110 | - | 1543738..1545567 (+) | 1830 | WP_124645117.1 | Wzy polymerase domain-containing protein | - |
| FAZ30_RS07115 | - | 1545663..1547450 (+) | 1788 | WP_124645116.1 | Wzy polymerase domain-containing protein | - |
| FAZ30_RS07120 | rpoH | 1547519..1548382 (-) | 864 | WP_103524438.1 | RNA polymerase sigma factor RpoH | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14710.59 Da Isoelectric Point: 8.4688
>NTDB_id=360538 FAZ30_RS07105 WP_124645118.1 1543247..1543681(+) (pilA) [Aquitalea aquatilis strain THG-DN7.12]
MNSKIQQGFTLIELMIVVAIIGILAAIAIPAYQDYTKRARVTEGLSLASAAKTAVSEYYASNNQFPTSNASAGLSTSISG
NAVSSVVVGTSGVITVTYNTLVDSTGSANTLTLSPSSGSGAISWKCAAATLPTNWVPSNCRNGN
MNSKIQQGFTLIELMIVVAIIGILAAIAIPAYQDYTKRARVTEGLSLASAAKTAVSEYYASNNQFPTSNASAGLSTSISG
NAVSSVVVGTSGVITVTYNTLVDSTGSANTLTLSPSSGSGAISWKCAAATLPTNWVPSNCRNGN
Nucleotide
Download Length: 435 bp
>NTDB_id=360538 FAZ30_RS07105 WP_124645118.1 1543247..1543681(+) (pilA) [Aquitalea aquatilis strain THG-DN7.12]
ATGAATAGCAAAATTCAGCAAGGTTTTACCTTGATCGAACTGATGATCGTTGTTGCCATCATCGGTATTCTGGCTGCCAT
CGCTATCCCGGCCTACCAGGATTACACCAAGCGTGCGCGTGTAACGGAAGGTTTGTCGCTGGCATCTGCAGCCAAGACTG
CCGTATCTGAATATTACGCATCTAATAACCAGTTTCCGACGTCAAATGCTTCGGCAGGTTTGTCAACATCTATTTCAGGT
AATGCTGTTTCCAGTGTGGTGGTTGGTACCTCTGGTGTTATTACCGTGACTTATAACACATTAGTTGACTCTACCGGGTC
CGCTAATACTTTGACCTTGAGCCCTAGTTCGGGAAGTGGTGCAATTTCGTGGAAATGTGCTGCAGCTACCCTTCCAACAA
ACTGGGTACCTTCCAACTGCCGCAACGGTAACTGA
ATGAATAGCAAAATTCAGCAAGGTTTTACCTTGATCGAACTGATGATCGTTGTTGCCATCATCGGTATTCTGGCTGCCAT
CGCTATCCCGGCCTACCAGGATTACACCAAGCGTGCGCGTGTAACGGAAGGTTTGTCGCTGGCATCTGCAGCCAAGACTG
CCGTATCTGAATATTACGCATCTAATAACCAGTTTCCGACGTCAAATGCTTCGGCAGGTTTGTCAACATCTATTTCAGGT
AATGCTGTTTCCAGTGTGGTGGTTGGTACCTCTGGTGTTATTACCGTGACTTATAACACATTAGTTGACTCTACCGGGTC
CGCTAATACTTTGACCTTGAGCCCTAGTTCGGGAAGTGGTGCAATTTCGTGGAAATGTGCTGCAGCTACCCTTCCAACAA
ACTGGGTACCTTCCAACTGCCGCAACGGTAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.882 |
100 |
0.542 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
51.095 |
95.139 |
0.486 |
| pilA2 | Legionella pneumophila str. Paris |
51.095 |
95.139 |
0.486 |
| comP | Acinetobacter baylyi ADP1 |
46.939 |
100 |
0.479 |
| pilA/pilA1 | Eikenella corrodens VA1 |
42.308 |
100 |
0.458 |
| pilE | Neisseria gonorrhoeae MS11 |
40.741 |
100 |
0.458 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
40.994 |
100 |
0.458 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
34.054 |
100 |
0.437 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
41.481 |
93.75 |
0.389 |
| pilA | Acinetobacter baumannii strain A118 |
38.298 |
97.917 |
0.375 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.806 |
100 |
0.368 |