Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   E4Z98_RS02180 Genome accession   NZ_CP038865
Coordinates   449869..451152 (+) Length   427 a.a.
NCBI ID   WP_135253903.1    Uniprot ID   A0AAJ5EFE1
Organism   Vagococcus xieshaowenii strain CF-49     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 444869..456152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4Z98_RS02160 (E4Z98_02160) ald 445886..446995 (+) 1110 WP_135253895.1 alanine dehydrogenase -
  E4Z98_RS02165 (E4Z98_02165) tdcB 446995..447999 (+) 1005 WP_135253897.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
  E4Z98_RS02170 (E4Z98_02170) - 448221..449018 (+) 798 WP_135253899.1 isoprenyl transferase -
  E4Z98_RS02175 (E4Z98_02175) - 449019..449828 (+) 810 WP_135253901.1 phosphatidate cytidylyltransferase -
  E4Z98_RS02180 (E4Z98_02180) eeP 449869..451152 (+) 1284 WP_135253903.1 RIP metalloprotease RseP Regulator
  E4Z98_RS02185 (E4Z98_02185) - 451176..452885 (+) 1710 WP_135253905.1 proline--tRNA ligase -
  E4Z98_RS02190 (E4Z98_02190) arcA 453210..454433 (+) 1224 WP_135253907.1 arginine deiminase -
  E4Z98_RS02195 (E4Z98_02195) argF 454466..455488 (+) 1023 WP_135253909.1 ornithine carbamoyltransferase -

Sequence


Protein


Download         Length: 427 a.a.        Molecular weight: 47155.29 Da        Isoelectric Point: 7.4613

>NTDB_id=356035 E4Z98_RS02180 WP_135253903.1 449869..451152(+) (eeP) [Vagococcus xieshaowenii strain CF-49]
MKTLLVFIFVFGLIVVIHELGHFIFAKRSGILVREFAIGMGPKIFSHRDKSGTLYTIRILPMGGYVRMAGMGEEEVALPP
GKPLSVELNDKGDVSRINTSHKVTLTNGIPLELLEADLEDKLYLKGYVNGEEANETTYTVDHDATIIEEDGTEVRIAPRD
VQFQSAKLYQRMLTNFAGPLFNFILTFVLFLLVLFMQGGVAANDTSSLIGGVQADSPADKAGMKPDDRILEIEGTKVTQF
AEVGKLLEKTKDKPINVVVEREKAEKTLTLTPKKVTENGKDRYILGIQGAVRLKKLSFGEKFKEAAVQTKNSALTIFNAL
KDLIAGFSLDKLGGPVMIYQASSELSNQSFVTILSFIAMLSVNLGIMNLLPIPMLDGGKLLFNIFEGIRRKPLNQEIEMK
ITLASAILLIGLIVLVTWNDIMRFLGR

Nucleotide


Download         Length: 1284 bp        

>NTDB_id=356035 E4Z98_RS02180 WP_135253903.1 449869..451152(+) (eeP) [Vagococcus xieshaowenii strain CF-49]
ATGAAAACATTATTAGTATTTATTTTTGTTTTCGGGTTGATTGTGGTCATCCATGAACTAGGGCATTTTATTTTTGCCAA
GCGTTCAGGTATTTTAGTTCGTGAATTTGCCATTGGCATGGGACCAAAGATTTTTAGTCACCGTGATAAATCGGGAACGT
TATATACAATTAGAATTTTGCCAATGGGTGGTTATGTCCGAATGGCGGGTATGGGTGAAGAAGAAGTAGCGCTTCCTCCG
GGTAAACCGCTGTCAGTCGAGCTAAATGATAAGGGAGATGTTAGCCGAATTAACACGAGTCATAAAGTGACGTTAACCAA
TGGGATTCCATTGGAGTTATTAGAAGCGGACTTAGAAGATAAGCTGTATTTAAAAGGTTACGTAAACGGCGAAGAAGCAA
ACGAGACAACGTACACAGTTGATCATGATGCGACCATTATTGAAGAAGATGGCACAGAAGTTCGAATTGCTCCACGAGAC
GTTCAATTTCAATCAGCCAAATTATACCAACGTATGTTAACGAATTTTGCAGGCCCTCTATTTAATTTTATTTTGACGTT
CGTGTTGTTTTTATTAGTATTATTTATGCAAGGTGGCGTAGCAGCAAATGATACATCAAGTTTAATTGGTGGTGTTCAGG
CAGATAGTCCAGCCGATAAAGCAGGTATGAAGCCTGATGATCGTATCCTTGAAATTGAAGGAACAAAAGTCACACAGTTT
GCTGAAGTTGGCAAACTGTTAGAAAAAACTAAAGATAAGCCAATCAACGTGGTTGTTGAGCGTGAAAAGGCAGAAAAAAC
CTTAACCTTAACACCTAAAAAAGTAACAGAAAATGGAAAAGACCGTTACATTTTGGGGATTCAAGGTGCGGTTAGACTGA
AAAAATTATCTTTCGGGGAAAAATTTAAAGAAGCAGCCGTTCAAACAAAAAATAGTGCGTTAACTATTTTTAATGCCTTG
AAAGACTTGATTGCTGGTTTTAGTTTAGATAAATTAGGTGGACCTGTGATGATTTATCAAGCTTCATCAGAATTATCAAA
TCAAAGTTTTGTGACTATTTTAAGCTTTATTGCGATGTTAAGTGTGAACTTAGGAATTATGAATTTATTACCGATTCCTA
TGTTAGATGGCGGTAAACTATTGTTTAATATTTTTGAAGGCATTCGTCGCAAACCTTTAAATCAAGAGATAGAAATGAAA
ATTACTTTAGCAAGTGCGATCTTGTTAATCGGTTTAATTGTATTAGTCACATGGAATGATATTATGAGATTTTTAGGACG
CTAG

Domains


Predicted by InterproScan.

(7-411)

(209-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.956

100

0.494

  eeP Streptococcus thermophilus LMD-9

48.724

100

0.492


Multiple sequence alignment