Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | KAN01_RS01600 | Genome accession | NZ_CP038816 |
| Coordinates | 338127..338570 (+) | Length | 147 a.a. |
| NCBI ID | WP_032011721.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain KAN01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 333127..343570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN01_RS01580 (KAN01_01580) | - | 334518..335405 (+) | 888 | WP_032011719.1 | metal-dependent hydrolase | - |
| KAN01_RS01585 (KAN01_01585) | - | 335539..336129 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| KAN01_RS01590 (KAN01_01590) | - | 336151..337233 (+) | 1083 | WP_065286472.1 | TPM domain-containing protein | - |
| KAN01_RS01595 (KAN01_01595) | - | 337227..337787 (+) | 561 | WP_032011720.1 | TPM domain-containing protein | - |
| KAN01_RS01600 (KAN01_01600) | comP | 338127..338570 (+) | 444 | WP_032011721.1 | pilin | Machinery gene |
| KAN01_RS01605 (KAN01_01605) | - | 338692..340326 (+) | 1635 | WP_168246684.1 | O-antigen ligase family protein | - |
| KAN01_RS01610 (KAN01_01610) | - | 340491..342119 (+) | 1629 | WP_135924488.1 | PglL family O-oligosaccharyltransferase | - |
| KAN01_RS01615 (KAN01_01615) | bfr | 342160..342624 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| KAN01_RS01620 (KAN01_01620) | - | 342869..343063 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 15351.54 Da Isoelectric Point: 7.7713
>NTDB_id=355721 KAN01_RS01600 WP_032011721.1 338127..338570(+) (comP) [Acinetobacter nosocomialis strain KAN01]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFSATDSVSSI
TPNATNGSIKIVYSNKVKDIELTLTPYDGGGNTPLTAGTVPTNQITWKCTVATPADNNKYVPANCRS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTVIAENAGNGASSLVLGVPNFSATDSVSSI
TPNATNGSIKIVYSNKVKDIELTLTPYDGGGNTPLTAGTVPTNQITWKCTVATPADNNKYVPANCRS
Nucleotide
Download Length: 444 bp
>NTDB_id=355721 KAN01_RS01600 WP_032011721.1 338127..338570(+) (comP) [Acinetobacter nosocomialis strain KAN01]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCTTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGGGCTTCTAGTTTAGTTTTAGGAGTACCTAATTTTAGTGCTACAGATAGTGTTTCATCAATT
ACACCTAATGCTACTAATGGGTCAATTAAAATAGTCTATAGTAATAAAGTAAAAGATATTGAACTTACTTTAACTCCTTA
TGATGGTGGTGGTAACACACCACTAACAGCTGGTACGGTTCCAACAAATCAAATCACTTGGAAGTGTACTGTAGCTACAC
CAGCGGATAATAACAAGTATGTTCCTGCGAACTGTCGTAGCTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTACATTGTCCGCTCAAAAGTAACAGAAGGTTTAAATCTAGCATCTTCTTATAAAACTGTAATTG
CTGAAAATGCAGGAAATGGGGCTTCTAGTTTAGTTTTAGGAGTACCTAATTTTAGTGCTACAGATAGTGTTTCATCAATT
ACACCTAATGCTACTAATGGGTCAATTAAAATAGTCTATAGTAATAAAGTAAAAGATATTGAACTTACTTTAACTCCTTA
TGATGGTGGTGGTAACACACCACTAACAGCTGGTACGGTTCCAACAAATCAAATCACTTGGAAGTGTACTGTAGCTACAC
CAGCGGATAATAACAAGTATGTTCCTGCGAACTGTCGTAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
46.296 |
100 |
0.51 |
| pilA2 | Legionella pneumophila str. Paris |
48.299 |
100 |
0.483 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.299 |
100 |
0.483 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.025 |
100 |
0.476 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.5 |
100 |
0.469 |
| pilA | Acinetobacter baumannii strain A118 |
43.624 |
100 |
0.442 |
| pilA | Pseudomonas aeruginosa PAK |
38.037 |
100 |
0.422 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.216 |
100 |
0.408 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.585 |
100 |
0.408 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.415 |
100 |
0.374 |
| pilE | Neisseria gonorrhoeae MS11 |
32.927 |
100 |
0.367 |