Detailed information
Bioinformatically predicted
Overview
| Name | comYA | Type | Machinery gene |
| Locus tag | E3C75_RS01090 | Genome accession | NZ_CP038020 |
| Coordinates | 209503..210444 (-) | Length | 313 a.a. |
| NCBI ID | WP_014622005.1 | Uniprot ID | A0A2X3UX10 |
| Organism | Streptococcus thermophilus strain ATCC 19258 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 204503..215444
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3C75_RS01050 | - | 204579..205772 (-) | 1194 | WP_084826168.1 | acetate kinase | - |
| E3C75_RS01055 | comYH | 205828..206784 (-) | 957 | WP_023909974.1 | class I SAM-dependent methyltransferase | Machinery gene |
| E3C75_RS01060 | comGG | 206829..207146 (-) | 318 | WP_023909975.1 | competence type IV pilus minor pilin ComGG | - |
| E3C75_RS01065 | comYF | 207124..207561 (-) | 438 | WP_084825661.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3C75_RS01070 | comGE | 207545..207838 (-) | 294 | WP_100262274.1 | competence type IV pilus minor pilin ComGE | - |
| E3C75_RS01075 | comYD | 207810..208238 (-) | 429 | WP_171815055.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3C75_RS01080 | comYC | 208198..208524 (-) | 327 | WP_023909980.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3C75_RS01085 | comYB | 208521..209621 (-) | 1101 | WP_133264040.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3C75_RS01090 | comYA | 209503..210444 (-) | 942 | WP_014622005.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3C75_RS01095 | - | 210525..210887 (-) | 363 | WP_111679734.1 | DUF1033 family protein | - |
| E3C75_RS01100 | rpoC | 211046..214684 (-) | 3639 | WP_111679735.1 | DNA-directed RNA polymerase subunit beta' | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 35421.62 Da Isoelectric Point: 6.3927
>NTDB_id=351383 E3C75_RS01090 WP_014622005.1 209503..210444(-) (comYA) [Streptococcus thermophilus strain ATCC 19258]
MVTEFAKEMIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDFMASLIGHFKFVAGMMVGEKRRSQLGACDYD
CGDGHLVSLRLSTVGDYRGLESLVIRILHSERRELVYWNQGIQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQERFKGQ
QVISIEDPVEIKQDNVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSIAGV
YERLLDLGVDKSELDNALQGIAYMRLIKGGGVIDFARENFQNHSSTNWNQQLEGLVKQGCLTERDIQGEKIKD
MVTEFAKEMIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDFMASLIGHFKFVAGMMVGEKRRSQLGACDYD
CGDGHLVSLRLSTVGDYRGLESLVIRILHSERRELVYWNQGIQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQERFKGQ
QVISIEDPVEIKQDNVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSIAGV
YERLLDLGVDKSELDNALQGIAYMRLIKGGGVIDFARENFQNHSSTNWNQQLEGLVKQGCLTERDIQGEKIKD
Nucleotide
Download Length: 942 bp
>NTDB_id=351383 E3C75_RS01090 WP_014622005.1 209503..210444(-) (comYA) [Streptococcus thermophilus strain ATCC 19258]
ATGGTAACAGAATTTGCTAAGGAAATGATCAAAAATGCTGATAGTTGTGGGGCTCAAGACATCTATGTCATTCCACGTCA
GGATAATTATGAGCTCTATATGCGAGTCGGGCAAGAGAGGAGATTGATTGATGTATATCGGCCTGATTTCATGGCTAGTC
TTATTGGTCACTTTAAATTTGTGGCGGGAATGATGGTGGGTGAGAAGCGTAGGAGTCAACTGGGTGCATGTGACTATGAT
TGTGGTGACGGTCACTTGGTTTCTCTGCGTTTATCAACTGTTGGAGACTATCGAGGTTTGGAGAGCTTGGTTATCCGTAT
CCTACATTCCGAACGTCGAGAATTAGTGTATTGGAATCAAGGAATCCAGCCTATTAAGGATGCCTTGGATTATAGAGGAC
TGTATCTCTTTGCGGGTCCCGTAGGTTCTGGGAAGACCACACTTATGCATGAGTTGGTTCAGGAGCGTTTTAAGGGGCAG
CAGGTAATTTCGATTGAGGATCCTGTTGAAATCAAACAGGATAATGTCTTGCAACTCCAGGTTAATCAGGTGATTGATAT
GACCTATGATAGTTTGATTAAGCTATCTCTACGTCACCGTCCAGATGTTTTGATTATTGGGGAGATTCGGGATAAGGAGA
CTGCCCGGGCAGTTATTAGAGCTAGTCTAACAGGTGTAACTGTTCTTTCAACTATTCATGCTAAGAGTATTGCTGGCGTT
TACGAACGTCTCTTGGACCTTGGCGTAGATAAGTCTGAGTTGGATAATGCTCTACAAGGCATTGCCTACATGCGTTTGAT
CAAGGGGGGAGGTGTGATTGATTTTGCCAGAGAAAATTTCCAAAACCATTCGTCGACCAACTGGAATCAGCAGTTGGAAG
GTTTGGTTAAACAAGGATGTCTCACTGAGAGGGATATCCAAGGGGAAAAAATTAAAGATTAG
ATGGTAACAGAATTTGCTAAGGAAATGATCAAAAATGCTGATAGTTGTGGGGCTCAAGACATCTATGTCATTCCACGTCA
GGATAATTATGAGCTCTATATGCGAGTCGGGCAAGAGAGGAGATTGATTGATGTATATCGGCCTGATTTCATGGCTAGTC
TTATTGGTCACTTTAAATTTGTGGCGGGAATGATGGTGGGTGAGAAGCGTAGGAGTCAACTGGGTGCATGTGACTATGAT
TGTGGTGACGGTCACTTGGTTTCTCTGCGTTTATCAACTGTTGGAGACTATCGAGGTTTGGAGAGCTTGGTTATCCGTAT
CCTACATTCCGAACGTCGAGAATTAGTGTATTGGAATCAAGGAATCCAGCCTATTAAGGATGCCTTGGATTATAGAGGAC
TGTATCTCTTTGCGGGTCCCGTAGGTTCTGGGAAGACCACACTTATGCATGAGTTGGTTCAGGAGCGTTTTAAGGGGCAG
CAGGTAATTTCGATTGAGGATCCTGTTGAAATCAAACAGGATAATGTCTTGCAACTCCAGGTTAATCAGGTGATTGATAT
GACCTATGATAGTTTGATTAAGCTATCTCTACGTCACCGTCCAGATGTTTTGATTATTGGGGAGATTCGGGATAAGGAGA
CTGCCCGGGCAGTTATTAGAGCTAGTCTAACAGGTGTAACTGTTCTTTCAACTATTCATGCTAAGAGTATTGCTGGCGTT
TACGAACGTCTCTTGGACCTTGGCGTAGATAAGTCTGAGTTGGATAATGCTCTACAAGGCATTGCCTACATGCGTTTGAT
CAAGGGGGGAGGTGTGATTGATTTTGCCAGAGAAAATTTCCAAAACCATTCGTCGACCAACTGGAATCAGCAGTTGGAAG
GTTTGGTTAAACAAGGATGTCTCACTGAGAGGGATATCCAAGGGGAAAAAATTAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYA | Streptococcus mutans UA159 |
64.537 |
100 |
0.645 |
| comYA | Streptococcus mutans UA140 |
64.537 |
100 |
0.645 |
| comGA/cglA/cilD | Streptococcus mitis NCTC 12261 |
64.952 |
99.361 |
0.645 |
| comGA/cglA/cilD | Streptococcus pneumoniae D39 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae Rx1 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae R6 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae TIGR4 |
63.666 |
99.361 |
0.633 |
| comYA | Streptococcus gordonii str. Challis substr. CH1 |
62.939 |
100 |
0.629 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
61.859 |
99.681 |
0.617 |
| comGA | Lactococcus lactis subsp. cremoris KW2 |
51.768 |
99.361 |
0.514 |
| comGA | Latilactobacillus sakei subsp. sakei 23K |
38.816 |
97.125 |
0.377 |