Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EXW33_RS22990 | Genome accession | NZ_CP036014 |
| Coordinates | 4492945..4493250 (+) | Length | 101 a.a. |
| NCBI ID | WP_000159135.1 | Uniprot ID | - |
| Organism | Bacillus toyonensis strain BPN45/4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4487945..4498250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW33_RS22985 (EXW33_23550) | - | 4488819..4491824 (+) | 3006 | WP_001085270.1 | DEAD/DEAH box helicase family protein | - |
| EXW33_RS22990 (EXW33_23560) | ssbA | 4492945..4493250 (+) | 306 | WP_000159135.1 | single-stranded DNA-binding protein | Machinery gene |
| EXW33_RS22995 (EXW33_23565) | - | 4493611..4494000 (+) | 390 | WP_000940649.1 | hypothetical protein | - |
| EXW33_RS23000 (EXW33_23575) | - | 4494539..4495666 (+) | 1128 | WP_000692595.1 | conserved virulence factor C family protein | - |
| EXW33_RS23005 (EXW33_23580) | - | 4495670..4496053 (+) | 384 | WP_000634894.1 | DUF393 domain-containing protein | - |
| EXW33_RS23010 (EXW33_23585) | - | 4496136..4496570 (+) | 435 | WP_000063703.1 | BrxA/BrxB family bacilliredoxin | - |
| EXW33_RS23015 (EXW33_23590) | - | 4496620..4497396 (+) | 777 | WP_000637472.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11569.14 Da Isoelectric Point: 9.4228
>NTDB_id=345904 EXW33_RS22990 WP_000159135.1 4492945..4493250(+) (ssbA) [Bacillus toyonensis strain BPN45/4]
MTKDPELYYTKQGVAYARICVAVNRGFRNSLGEQQADFINCVVWRRAAENVTEYCTKGSLVGITGRIHTNNYDDEKGKKI
YRTEVVIESITFLERRRKGAS
MTKDPELYYTKQGVAYARICVAVNRGFRNSLGEQQADFINCVVWRRAAENVTEYCTKGSLVGITGRIHTNNYDDEKGKKI
YRTEVVIESITFLERRRKGAS
Nucleotide
Download Length: 306 bp
>NTDB_id=345904 EXW33_RS22990 WP_000159135.1 4492945..4493250(+) (ssbA) [Bacillus toyonensis strain BPN45/4]
TTGACAAAGGATCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACGAATATGTGTTGCAGTGAATAGAGGATT
TCGAAATAGTTTAGGTGAACAACAAGCAGATTTTATAAATTGTGTCGTTTGGCGAAGAGCAGCTGAAAATGTAACAGAAT
ATTGTACGAAGGGATCACTTGTTGGAATTACAGGGCGTATTCATACGAATAATTACGATGATGAAAAAGGAAAGAAAATA
TATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGAGGAAGGGGGCATCGTAA
TTGACAAAGGATCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACGAATATGTGTTGCAGTGAATAGAGGATT
TCGAAATAGTTTAGGTGAACAACAAGCAGATTTTATAAATTGTGTCGTTTGGCGAAGAGCAGCTGAAAATGTAACAGAAT
ATTGTACGAAGGGATCACTTGTTGGAATTACAGGGCGTATTCATACGAATAATTACGATGATGAAAAAGGAAAGAAAATA
TATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGAGGAAGGGGGCATCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.167 |
95.05 |
0.515 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
47.959 |
97.03 |
0.465 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
47.917 |
95.05 |
0.455 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.667 |
95.05 |
0.396 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
40 |
99.01 |
0.396 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
39 |
99.01 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
39 |
99.01 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
39 |
99.01 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39 |
99.01 |
0.386 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
38 |
99.01 |
0.376 |
| ssbB/cilA | Streptococcus mitis SK321 |
38 |
99.01 |
0.376 |
| ssbA | Streptococcus mutans UA159 |
39.583 |
95.05 |
0.376 |