Detailed information NTG0345230

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: EXN22_RS02955
• Genome accession: NZ_CP035952
• Coordinates: 634825..636066 (+)
• Length: 413 a.a.
• NCBI ID: WP_130262480.1
• Uniprot ID: A0A411MD31
• Organism: Pseudomonas tructae strain SNU WT1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 629825..641066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXN22_RS02940 (EXN22_02940)	-	630279..632732 (-)	2454	WP_407691955.1	penicillin-binding protein 1A	-
EXN22_RS02945 (EXN22_02945)	pilM	632861..633967 (+)	1107	WP_165392179.1	pilus assembly protein PilM	-
EXN22_RS02950 (EXN22_02950)	-	633964..634800 (+)	837	WP_130262478.1	pilus assembly protein PilP	-
EXN22_RS02955 (EXN22_02955)	pilQ	634825..636066 (+)	1242	WP_130262480.1	type IV pilus secretin PilQ	Machinery gene
EXN22_RS02960 (EXN22_02960)	aroK	636071..636589 (+)	519	WP_130262482.1	shikimate kinase AroK	-
EXN22_RS02965 (EXN22_02965)	aroB	636689..637786 (+)	1098	WP_130262484.1	3-dehydroquinate synthase	-
EXN22_RS02970 (EXN22_02970)	-	637803..639407 (+)	1605	WP_130262486.1	SPOR domain-containing protein	-

Sequence

Protein

• Length: 413 a.a.
• Molecular weight: 44293.78 Da
• Isoelectric Point: 5.0811

>NTDB_id=345230 EXN22_RS02955 WP_130262480.1 634825..636066(+) (pilQ) [Pseudomonas tructae strain SNU WT1]
MGKGAVIAVLLWGCLSAGAVAGKQLYGGEPLSLNFQDVEVRTVLQVLADLSGFNLVASDAVQGTVTLRLEDVPWDQALDL
VLRSKGLEQRKDGNVLLVAPLAEMAGAVPSRRALIPIHHARAADIAELFHTLMAHDAGGASHGSLSVDERTNTLVASQSP
ERLEELRRLIGELDVPVRQVMIEARIVEANVDFEKALGVRWGGAVQLGKGLSLGSGDTFVDLGVDRAAASIGVGLVRNNV
LLDLELSAMEKTGNGEIISQPKVVTADKETARILKGTEVPYQETSGSGATSVTFREASLSLEVTPQITPDNRVIMAVKVT
KDEPDYLNALEHVPAIRKNEVNAKVSIEDGQTIVIGGVYSTVQSKVVDKVPFFGDVPYVGRLFRRDVLQEKKSELLVFLT
PRIMSDQAIAVSR

Nucleotide

• Length: 1242 bp

>NTDB_id=345230 EXN22_RS02955 WP_130262480.1 634825..636066(+) (pilQ) [Pseudomonas tructae strain SNU WT1]
ATGGGCAAGGGAGCTGTCATTGCAGTGTTGTTGTGGGGTTGTCTGTCTGCAGGTGCTGTTGCCGGCAAGCAGTTGTACGG
TGGCGAGCCGTTGTCGTTGAACTTTCAGGATGTCGAAGTGCGCACAGTGCTGCAGGTGCTGGCGGACCTTTCCGGCTTCA
ACCTGGTGGCCAGTGACGCGGTGCAGGGCACCGTGACCCTGCGCCTGGAGGATGTGCCCTGGGATCAGGCCCTGGATCTG
GTGCTGCGCAGCAAGGGTCTGGAGCAGCGCAAGGACGGTAATGTGTTGCTGGTCGCACCGCTTGCCGAAATGGCTGGAGC
AGTACCGTCGCGGCGTGCACTGATTCCGATCCATCACGCCAGGGCCGCTGATATTGCCGAGCTCTTTCATACCCTGATGG
CCCACGACGCGGGTGGGGCCAGCCATGGCTCGCTGAGTGTCGACGAGCGCACCAATACACTGGTCGCCAGCCAGTCGCCG
GAACGTTTGGAAGAGCTGCGCAGGCTGATCGGTGAGCTGGATGTGCCGGTGCGTCAGGTCATGATCGAGGCGCGCATCGT
TGAGGCCAATGTCGATTTCGAGAAGGCCCTGGGGGTACGCTGGGGTGGGGCGGTGCAGTTGGGCAAGGGACTGAGCCTGG
GCAGTGGCGATACCTTCGTCGACCTCGGAGTCGATCGGGCGGCGGCCAGCATCGGCGTGGGCCTGGTGCGCAACAACGTG
CTGCTCGATCTGGAGCTCAGTGCCATGGAAAAGACCGGCAATGGCGAGATTATCTCCCAGCCCAAGGTGGTCACCGCCGA
CAAGGAAACCGCACGGATCCTCAAGGGTACCGAGGTGCCTTACCAGGAAACCAGTGGTAGCGGTGCCACATCCGTGACGT
TCCGCGAAGCATCGCTGTCTCTGGAAGTCACTCCGCAAATCACGCCGGACAACCGGGTGATCATGGCGGTTAAGGTGACC
AAGGATGAGCCGGACTATCTCAATGCCCTGGAGCATGTGCCGGCGATCCGCAAGAACGAGGTCAATGCCAAGGTGAGCAT
TGAAGATGGACAGACCATCGTTATCGGCGGCGTGTACTCGACGGTGCAAAGTAAAGTTGTCGACAAGGTGCCATTTTTCG
GCGATGTGCCGTATGTTGGGCGGCTGTTTCGTCGCGATGTTCTACAAGAGAAAAAATCCGAGCTGCTGGTCTTCCTGACT
CCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (54-100)

• Bacterial type II and III secretion system protein (Secretin) (248-404)

• Bacterial type II/III secretion system short domain (Secretin_N) (114-179)

3D structure

• AlphaFold DB: A0A411MD31

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	58.028	100	0.613
comQ	Acinetobacter baylyi ADP1	40.667	100	0.443
pilQ	Acinetobacter baumannii D1279779	39.525	100	0.443
pilQ	Acinetobacter baumannii strain A118	39.525	100	0.443
pilQ	Legionella pneumophila strain ERS1305867	42.993	100	0.438
pilQ	Legionella pneumophila strain Lp02	42.993	100	0.438
pilQ	Vibrio campbellii strain DS40M4	41.435	100	0.433
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	41.647	100	0.429
pilQ	Vibrio cholerae strain A1552	41.647	100	0.429
pilQ	Neisseria meningitidis MC58	36.322	100	0.383
pilQ	Neisseria meningitidis M1080	36.449	100	0.378
pilQ	Neisseria gonorrhoeae strain FA1090	36.449	100	0.378