Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FOB62_RS06665 Genome accession   NZ_CP044102
Coordinates   1301673..1303382 (+) Length   569 a.a.
NCBI ID   WP_003053361.1    Uniprot ID   A0ABU0A4B9
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1296673..1308382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS06630 (FOB62_06635) - 1296739..1297266 (+) 528 WP_012767579.1 5-formyltetrahydrofolate cyclo-ligase -
  FOB62_RS06635 (FOB62_06640) - 1297263..1297937 (+) 675 WP_003053389.1 rhomboid family intramembrane serine protease -
  FOB62_RS06640 (FOB62_06645) - 1298115..1298741 (-) 627 WP_003053353.1 DUF6198 family protein -
  FOB62_RS06645 (FOB62_06650) hasC 1298922..1299824 (-) 903 WP_003053363.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  FOB62_RS06655 (FOB62_06660) - 1300014..1301030 (-) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FOB62_RS06660 (FOB62_06665) rcrR 1301231..1301680 (+) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  FOB62_RS06665 (FOB62_06670) rcrP 1301673..1303382 (+) 1710 WP_003053361.1 ABC transporter ATP-binding protein Regulator
  FOB62_RS06670 (FOB62_06675) - 1303382..1305166 (+) 1785 WP_003053374.1 ABC transporter ATP-binding protein -
  FOB62_RS06675 (FOB62_06680) - 1305285..1306052 (+) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  FOB62_RS06680 (FOB62_06685) - 1306160..1306606 (+) 447 WP_003053378.1 dUTP diphosphatase -
  FOB62_RS06685 (FOB62_06690) radA 1306689..1308050 (+) 1362 WP_037587114.1 DNA repair protein RadA Machinery gene

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63345.98 Da        Isoelectric Point: 5.6522

>NTDB_id=340593 FOB62_RS06665 WP_003053361.1 1301673..1303382(+) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_654]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLDTESTMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=340593 FOB62_RS06665 WP_003053361.1 1301673..1303382(+) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTTCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTAATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATCGGCTACGGTTTTTCGTTGATGCAACCTGCTTTA
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCAA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTAGATACTGAGTCAACCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCGATTAAATCCTTGAGCCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGAATGTCGATTGCGCGTGGTGTTATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAAATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.915

100

0.362

Multiple sequence alignment