Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ES965_RS18805 | Genome accession | NZ_CP035391 |
| Coordinates | 3613272..3613613 (-) | Length | 113 a.a. |
| NCBI ID | WP_124059303.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103689 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3608272..3618613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES965_RS18790 (ES965_18790) | hepAB | 3608515..3611283 (+) | 2769 | WP_129092762.1 | DEAD/DEAH box helicase | - |
| ES965_RS18795 (ES965_18795) | ywpJ | 3611408..3612265 (-) | 858 | WP_124059299.1 | phosphatase YwpJ | - |
| ES965_RS18800 (ES965_18800) | glcR | 3612271..3613047 (-) | 777 | WP_124059301.1 | transcriptional regulator GlcR | - |
| ES965_RS18805 (ES965_18805) | ssbB | 3613272..3613613 (-) | 342 | WP_124059303.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| ES965_RS18810 (ES965_18810) | ywpG | 3613690..3614073 (-) | 384 | WP_014478204.1 | DynA interaction protein YwpG | - |
| ES965_RS18815 (ES965_18815) | ywpF | 3614248..3614658 (+) | 411 | WP_124059305.1 | YwpF-like family protein | - |
| ES965_RS18820 (ES965_18820) | - | 3614798..3615436 (-) | 639 | WP_069322955.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12476.14 Da Isoelectric Point: 7.8150
>NTDB_id=339655 ES965_RS18805 WP_124059303.1 3613272..3613613(-) (ssbB) [Bacillus subtilis strain SRCM103689]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGISGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGISGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=339655 ES965_RS18805 WP_124059303.1 3613272..3613613(-) (ssbB) [Bacillus subtilis strain SRCM103689]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCATAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCATAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
98.23 |
100 |
0.982 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
63.208 |
93.805 |
0.593 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.491 |
93.805 |
0.549 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
42.593 |
95.575 |
0.407 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
42.593 |
95.575 |
0.407 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
42.593 |
95.575 |
0.407 |
| ssbB/cilA | Streptococcus mitis SK321 |
42.593 |
95.575 |
0.407 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
40.952 |
92.92 |
0.381 |