Detailed information NTG0033341

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SP70585_RS10620
• Genome accession: NC_012468
• Coordinates: 1958380..1958814 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae 70585
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1953380..1963814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP70585_RS10585 (SP70585_2131)	comYH	1953917..1954870 (-)	954	WP_000345132.1	class I SAM-dependent methyltransferase	Machinery gene
SP70585_RS12905	-	1955216..1956018 (+)	803	Protein_1995	IS5 family transposase	-
SP70585_RS10600 (SP70585_2134)	-	1956169..1956645 (+)	477	WP_000777686.1	GNAT family N-acetyltransferase	-
SP70585_RS10605 (SP70585_2135)	comGG/cglG	1957300..1957713 (-)	414	WP_000265615.1	competence type IV pilus minor pilin ComGG	Machinery gene
SP70585_RS10610 (SP70585_2136)	comGF/cglF	1957691..1958152 (-)	462	WP_000250520.1	competence type IV pilus minor pilin ComGF	Machinery gene
SP70585_RS10615 (SP70585_2137)	comGE/cglE	1958115..1958417 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
SP70585_RS10620 (SP70585_2138)	comGD/cglD	1958380..1958814 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
SP70585_RS10625 (SP70585_2139)	comGC/cglC	1958777..1959100 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
SP70585_RS10630 (SP70585_2140)	comGB/cglB	1959102..1960118 (-)	1017	WP_078141518.1	competence type IV pilus assembly protein ComGB	Machinery gene
SP70585_RS10635 (SP70585_2141)	comGA/cglA/cilD	1960066..1961007 (-)	942	WP_000249572.1	competence type IV pilus ATPase ComGA	Machinery gene
SP70585_RS10640 (SP70585_2142)	-	1961083..1961448 (-)	366	WP_000286415.1	DUF1033 family protein	-
SP70585_RS10645 (SP70585_2143)	-	1961599..1962657 (-)	1059	WP_000649465.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=33341 SP70585_RS10620 WP_033606693.1 1958380..1958814(-) (comGD/cglD) [Streptococcus pneumoniae 70585]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=33341 SP70585_RS10620 WP_033606693.1 1958380..1958814(-) (comGD/cglD) [Streptococcus pneumoniae 70585]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444