Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CA899_RS19715 | Genome accession | NZ_CP042903 |
| Coordinates | 4094239..4094679 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain CFSAN061761 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4089239..4099679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA899_RS19695 (CA899_019925) | aroP | 4090237..4091610 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| CA899_RS19700 (CA899_019930) | ampE | 4091653..4092507 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| CA899_RS19705 (CA899_019935) | ampD | 4092504..4093055 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| CA899_RS19710 (CA899_019940) | nadC | 4093143..4094036 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| CA899_RS19715 (CA899_019945) | pilA | 4094239..4094679 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| CA899_RS19720 (CA899_019950) | pilB | 4094689..4096074 (+) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| CA899_RS19725 (CA899_019955) | hofC | 4096064..4097266 (+) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| CA899_RS19730 (CA899_019960) | guaC | 4097301..4098344 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| CA899_RS19735 | - | 4098500..4098544 (-) | 45 | WP_120795372.1 | protein YacM | - |
| CA899_RS19740 (CA899_019965) | coaE | 4098569..4099189 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=332991 CA899_RS19715 WP_000360904.1 4094239..4094679(+) (pilA) [Escherichia coli strain CFSAN061761]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=332991 CA899_RS19715 WP_000360904.1 4094239..4094679(+) (pilA) [Escherichia coli strain CFSAN061761]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |