Detailed information NTG0331758

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: EHW89_RS01180
• Genome accession: NZ_CP034543
• Coordinates: 227646..228041 (+)
• Length: 131 a.a.
• NCBI ID: WP_022526842.1
• Uniprot ID: -
• Organism: Streptococcus periodonticum strain KCOM 2412
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 222646..233041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHW89_RS09605 (EHW89_01140)	-	222732..222965 (+)	234	Protein_188	CPBP family intramembrane glutamate endopeptidase	-
EHW89_RS01145 (EHW89_01145)	-	223032..224333 (+)	1302	WP_126466449.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
EHW89_RS01155 (EHW89_01155)	-	224515..225075 (+)	561	WP_126466451.1	folate family ECF transporter S component	-
EHW89_RS01160 (EHW89_01160)	pepA	225138..226202 (-)	1065	WP_126468031.1	glutamyl aminopeptidase	-
EHW89_RS01165 (EHW89_01165)	-	226322..226609 (+)	288	WP_126466452.1	DUF4651 domain-containing protein	-
EHW89_RS01170 (EHW89_01170)	-	226606..226923 (+)	318	WP_106383916.1	thioredoxin family protein	-
EHW89_RS01175 (EHW89_01175)	ytpR	226940..227566 (+)	627	WP_106383917.1	YtpR family tRNA-binding protein	-
EHW89_RS01180 (EHW89_01180)	ssbB/cilA	227646..228041 (+)	396	WP_022526842.1	single-stranded DNA-binding protein	Machinery gene
EHW89_RS01185 (EHW89_01185)	-	228338..229324 (+)	987	WP_126466453.1	sugar ABC transporter substrate-binding protein	-
EHW89_RS01190 (EHW89_01190)	-	229324..230637 (+)	1314	WP_126466454.1	sensor histidine kinase	-
EHW89_RS01195 (EHW89_01195)	-	230630..231313 (+)	684	WP_049507674.1	response regulator transcription factor	-
EHW89_RS01200 (EHW89_01200)	-	231310..232596 (+)	1287	WP_126466455.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14728.64 Da
• Isoelectric Point: 5.9381

>NTDB_id=331758 EHW89_RS01180 WP_022526842.1 227646..228041(+) (ssbB/cilA) [Streptococcus periodonticum strain KCOM 2412]
MYNKVILIGRLVNTPELNKTANDKSVARATLAVNRRYKGQNGEREADFVNVVVWGKLAETLASYASKGSLISLDGELRTR
RYEKDNVTHYVTEVLCNGFQLLESRAQRALRENNAGADLADLLLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=331758 EHW89_RS01180 WP_022526842.1 227646..228041(+) (ssbB/cilA) [Streptococcus periodonticum strain KCOM 2412]
ATGTATAATAAAGTAATTTTAATTGGTCGCTTGGTGAATACACCAGAGTTAAACAAAACAGCTAATGATAAATCTGTGGC
GCGTGCAACACTTGCTGTCAATCGTCGCTACAAAGGACAAAATGGTGAACGAGAAGCGGACTTTGTAAATGTCGTTGTCT
GGGGTAAGTTAGCCGAAACTTTGGCAAGTTATGCAAGTAAAGGCAGCCTGATTTCGCTAGACGGTGAACTTCGCACTCGC
CGCTATGAGAAGGACAATGTTACCCACTATGTCACAGAAGTACTTTGCAATGGCTTCCAGCTATTAGAAAGTCGTGCACA
GCGAGCTCTTCGTGAAAATAATGCAGGTGCAGACTTGGCAGATTTGCTTCTGGAAGAAGAGGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	83.206	100	0.832
ssbB/cilA	Streptococcus pneumoniae Rx1	82.443	100	0.824
ssbB/cilA	Streptococcus pneumoniae D39	82.443	100	0.824
ssbB/cilA	Streptococcus pneumoniae R6	82.443	100	0.824
ssbB/cilA	Streptococcus mitis NCTC 12261	82.443	100	0.824
ssbB/cilA	Streptococcus mitis SK321	82.443	100	0.824
ssbA	Streptococcus mutans UA159	79.389	100	0.794
ssbB	Streptococcus sobrinus strain NIDR 6715-7	74.809	100	0.748
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	85.496	0.527
ssbA	Bacillus subtilis subsp. subtilis str. 168	49.057	80.916	0.397
ssb	Latilactobacillus sakei subsp. sakei 23K	43.22	90.076	0.389
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366