Detailed information NTG0331694

Bioinformatically predicted

Overview

• Name: ssbB
• Type: Machinery gene
• Locus tag: EJJ34_RS19785
• Genome accession: NZ_CP034484
• Coordinates: 3735453..3735794 (-)
• Length: 113 a.a.
• NCBI ID: WP_003227798.1
• Uniprot ID: C0SPB6
• Organism: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain NCIB 3610
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3730453..3740794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJJ34_RS19765 (EJJ34_19765)	hepAB	3730696..3733464 (+)	2769	WP_003227803.1	DEAD/DEAH box helicase	-
EJJ34_RS19775 (EJJ34_19775)	ywpJ	3733590..3734447 (-)	858	WP_003242946.1	phosphatase YwpJ	-
EJJ34_RS19780 (EJJ34_19780)	glcR	3734453..3735229 (-)	777	WP_003244075.1	transcriptional regulator GlcR	-
EJJ34_RS19785 (EJJ34_19785)	ssbB	3735453..3735794 (-)	342	WP_003227798.1	single-stranded DNA-binding protein SsbB	Machinery gene
EJJ34_RS19790 (EJJ34_19790)	ywpG	3735871..3736254 (-)	384	WP_003227796.1	DynA interaction protein YwpG	-
EJJ34_RS19795 (EJJ34_19795)	ywpF	3736429..3736839 (+)	411	WP_003227794.1	YwpF-like family protein	-
EJJ34_RS19800 (EJJ34_19800)	-	3736979..3737371 (-)	393	Protein_3807	class A sortase	-
EJJ34_RS23040 (EJJ34_19805)	-	3737358..3737747 (-)	390	WP_009968292.1	prealbumin-like fold domain-containing protein	-
EJJ34_RS19810 (EJJ34_19810)	ywpD	3737631..3738467 (+)	837	WP_003227787.1	histidine kinase	-
EJJ34_RS19815 (EJJ34_19815)	mscL	3738514..3738906 (-)	393	WP_003242893.1	large conductance mechanosensitive channel protein MscL	-
EJJ34_RS19820 (EJJ34_19820)	fabZ	3738979..3739404 (-)	426	WP_003221796.1	3-hydroxyacyl-ACP dehydratase FabZ	-
EJJ34_RS19825 (EJJ34_19825)	rapD	3739596..3740660 (+)	1065	WP_003227782.1	aspartate phosphatase RapD	-

Sequence

Protein

• Length: 113 a.a.
• Molecular weight: 12520.15 Da
• Isoelectric Point: 6.9498

>NTDB_id=331694 EJJ34_RS19785 WP_003227798.1 3735453..3735794(-) (ssbB) [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain NCIB 3610]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENEEGVNVYVTEVLADTVRFMDPKPREKAAD

Nucleotide

• Length: 342 bp

>NTDB_id=331694 EJJ34_RS19785 WP_003227798.1 3735453..3735794(-) (ssbB) [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain NCIB 3610]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• PDB: 3VDY

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.151	93.805	0.602
ssb	Latilactobacillus sakei subsp. sakei 23K	59.434	93.805	0.558
ssbB	Streptococcus sobrinus strain NIDR 6715-7	45.37	95.575	0.434
ssbB/cilA	Streptococcus pneumoniae TIGR4	44.444	95.575	0.425
ssbB/cilA	Streptococcus mitis NCTC 12261	44.444	95.575	0.425
ssbB/cilA	Streptococcus pneumoniae Rx1	43.519	95.575	0.416
ssbB/cilA	Streptococcus pneumoniae D39	43.519	95.575	0.416
ssbB/cilA	Streptococcus pneumoniae R6	43.519	95.575	0.416
ssbB/cilA	Streptococcus mitis SK321	43.519	95.575	0.416
ssbA	Streptococcus mutans UA159	44.34	93.805	0.416
ssbB	Lactococcus lactis subsp. cremoris KW2	41.905	92.92	0.389