Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DV160_RS00755 | Genome accession | NZ_CP031336 |
| Coordinates | 120571..121017 (+) | Length | 148 a.a. |
| NCBI ID | WP_002220239.1 | Uniprot ID | A0A0Y6S569 |
| Organism | Neisseria meningitidis strain M21717 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 115571..126017
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV160_RS00720 | - | 116697..117548 (-) | 852 | WP_002221624.1 | RNA polymerase factor sigma-54 | - |
| DV160_RS00725 | katA | 117897..119411 (+) | 1515 | WP_002221625.1 | catalase KatA | - |
| DV160_RS13905 | - | 119487..119609 (+) | 123 | WP_256864604.1 | hypothetical protein | - |
| DV160_RS00735 | - | 119735..119947 (+) | 213 | WP_002239456.1 | hypothetical protein | - |
| DV160_RS13910 | - | 120031..120159 (-) | 129 | WP_256864603.1 | hypothetical protein | - |
| DV160_RS13625 | - | 120164..120313 (+) | 150 | WP_228476408.1 | hypothetical protein | - |
| DV160_RS00755 | pilE | 120571..121017 (+) | 447 | WP_002220239.1 | pilin | Machinery gene |
| DV160_RS00765 | - | 121471..121971 (+) | 501 | WP_002220237.1 | REP-associated tyrosine transposase | - |
| DV160_RS00770 | - | 122435..123001 (+) | 567 | WP_002220235.1 | manganese efflux pump MntP family protein | - |
| DV160_RS00780 | - | 123435..125471 (-) | 2037 | WP_115425135.1 | M3 family metallopeptidase | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15648.94 Da Isoelectric Point: 9.3582
>NTDB_id=306051 DV160_RS00755 WP_002220239.1 120571..121017(+) (pilE) [Neisseria meningitidis strain M21717]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
Nucleotide
Download Length: 447 bp
>NTDB_id=306051 DV160_RS00755 WP_002220239.1 120571..121017(+) (pilE) [Neisseria meningitidis strain M21717]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
58.788 |
100 |
0.655 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
56.173 |
100 |
0.615 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.766 |
100 |
0.459 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.596 |
100 |
0.446 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.026 |
100 |
0.432 |
| comP | Acinetobacter baylyi ADP1 |
42.384 |
100 |
0.432 |
| pilA2 | Legionella pneumophila str. Paris |
42.657 |
96.622 |
0.412 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.259 |
96.622 |
0.399 |
| pilA | Pseudomonas aeruginosa PAK |
37.255 |
100 |
0.385 |
| pilA | Vibrio campbellii strain DS40M4 |
38.255 |
100 |
0.385 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.986 |
98.649 |
0.365 |