Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DV179_RS11960 | Genome accession | NZ_CP031331 |
| Coordinates | 2003922..2004368 (-) | Length | 148 a.a. |
| NCBI ID | WP_002220239.1 | Uniprot ID | A0A0Y6S569 |
| Organism | Neisseria meningitidis strain M26263 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1998922..2009368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV179_RS11935 | - | 1999468..2001504 (+) | 2037 | WP_002220233.1 | M3 family metallopeptidase | - |
| DV179_RS11945 | - | 2001938..2002504 (-) | 567 | WP_002220235.1 | manganese efflux pump MntP family protein | - |
| DV179_RS11950 | - | 2002968..2003468 (-) | 501 | WP_002220237.1 | transposase | - |
| DV179_RS11960 | pilE | 2003922..2004368 (-) | 447 | WP_002220239.1 | pilin | Machinery gene |
| DV179_RS14460 | - | 2004625..2004774 (-) | 150 | WP_228377787.1 | hypothetical protein | - |
| DV179_RS14580 | - | 2004779..2004907 (+) | 129 | WP_256864603.1 | hypothetical protein | - |
| DV179_RS11980 | - | 2004991..2005203 (-) | 213 | WP_002239456.1 | hypothetical protein | - |
| DV179_RS14585 | - | 2005329..2005451 (-) | 123 | WP_256864604.1 | hypothetical protein | - |
| DV179_RS11990 | katA | 2005527..2007041 (-) | 1515 | WP_002221625.1 | catalase KatA | - |
| DV179_RS11995 | - | 2007390..2008241 (+) | 852 | WP_002221624.1 | RNA polymerase sigma-54 factor | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15648.94 Da Isoelectric Point: 9.3582
>NTDB_id=305900 DV179_RS11960 WP_002220239.1 2003922..2004368(-) (pilE) [Neisseria meningitidis strain M26263]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
Nucleotide
Download Length: 447 bp
>NTDB_id=305900 DV179_RS11960 WP_002220239.1 2003922..2004368(-) (pilE) [Neisseria meningitidis strain M26263]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
58.788 |
100 |
0.655 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
56.173 |
100 |
0.615 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.766 |
100 |
0.459 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.596 |
100 |
0.446 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.026 |
100 |
0.432 |
| comP | Acinetobacter baylyi ADP1 |
42.384 |
100 |
0.432 |
| pilA2 | Legionella pneumophila str. Paris |
42.657 |
96.622 |
0.412 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.259 |
96.622 |
0.399 |
| pilA | Pseudomonas aeruginosa PAK |
37.255 |
100 |
0.385 |
| pilA | Vibrio campbellii strain DS40M4 |
38.255 |
100 |
0.385 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.986 |
98.649 |
0.365 |