Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | DWB95_RS06090 | Genome accession | NZ_CP031280 |
| Coordinates | 1247751..1248038 (+) | Length | 95 a.a. |
| NCBI ID | WP_154874788.1 | Uniprot ID | - |
| Organism | Staphylococcus pasteuri strain 3C | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1242751..1253038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB95_RS06060 (DWB95_06075) | - | 1243507..1243710 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| DWB95_RS06065 (DWB95_06080) | - | 1243707..1244693 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| DWB95_RS06070 (DWB95_06085) | - | 1244693..1245016 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| DWB95_RS06075 (DWB95_06090) | - | 1245020..1245643 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| DWB95_RS06080 (DWB95_06095) | comGA | 1245690..1246664 (+) | 975 | WP_154874385.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB95_RS06085 (DWB95_06100) | comGB | 1246636..1247703 (+) | 1068 | WP_029055748.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DWB95_RS06090 (DWB95_06105) | comGC | 1247751..1248038 (+) | 288 | WP_154874788.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB95_RS12550 | comGD | 1248016..1248465 (+) | 450 | WP_177244131.1 | competence type IV pilus minor pilin ComGD | - |
| DWB95_RS12555 | - | 1248497..1248745 (+) | 249 | WP_185817761.1 | hypothetical protein | - |
| DWB95_RS06105 (DWB95_06120) | - | 1249319..1249837 (+) | 519 | WP_186802334.1 | shikimate kinase | - |
| DWB95_RS06110 (DWB95_06125) | gcvT | 1250009..1251100 (+) | 1092 | WP_154874389.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DWB95_RS06115 (DWB95_06130) | gcvPA | 1251119..1252468 (+) | 1350 | WP_046466728.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10478.24 Da Isoelectric Point: 6.4438
>NTDB_id=305425 DWB95_RS06090 WP_154874788.1 1247751..1248038(+) (comGC) [Staphylococcus pasteuri strain 3C]
MAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQTTGCDAQVKMVNSQIEAYTLKHNRNPNTIQDLISEGFIKENQKNCK
SGETISINNGEAVAN
MAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQTTGCDAQVKMVNSQIEAYTLKHNRNPNTIQDLISEGFIKENQKNCK
SGETISINNGEAVAN
Nucleotide
Download Length: 288 bp
>NTDB_id=305425 DWB95_RS06090 WP_154874788.1 1247751..1248038(+) (comGC) [Staphylococcus pasteuri strain 3C]
ATGGCATTTACATTAATTGAAATGTTACTAGTTTTATTAATAATTAGCTTATTGCTTATTCTAATTATTCCCAATATAGC
TAAACAAACCGCTCATATACAAACTACTGGTTGTGACGCTCAAGTGAAAATGGTTAATAGTCAAATTGAAGCATATACTT
TAAAACACAATAGAAATCCTAATACCATCCAAGATTTAATTTCTGAAGGATTTATTAAAGAAAACCAAAAAAATTGCAAA
TCAGGAGAAACTATTAGTATTAATAATGGCGAAGCGGTTGCAAATTAA
ATGGCATTTACATTAATTGAAATGTTACTAGTTTTATTAATAATTAGCTTATTGCTTATTCTAATTATTCCCAATATAGC
TAAACAAACCGCTCATATACAAACTACTGGTTGTGACGCTCAAGTGAAAATGGTTAATAGTCAAATTGAAGCATATACTT
TAAAACACAATAGAAATCCTAATACCATCCAAGATTTAATTTCTGAAGGATTTATTAAAGAAAACCAAAAAAATTGCAAA
TCAGGAGAAACTATTAGTATTAATAATGGCGAAGCGGTTGCAAATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
87.234 |
98.947 |
0.863 |
| comGC | Staphylococcus aureus N315 |
87.234 |
98.947 |
0.863 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
44.792 |
100 |
0.453 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
42.857 |
95.789 |
0.411 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
42.857 |
95.789 |
0.411 |
| comGC/cglC | Streptococcus pneumoniae D39 |
42.857 |
95.789 |
0.411 |
| comGC/cglC | Streptococcus pneumoniae R6 |
42.857 |
95.789 |
0.411 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
43.333 |
94.737 |
0.411 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
41.489 |
98.947 |
0.411 |
| comYC | Streptococcus suis isolate S10 |
50.667 |
78.947 |
0.4 |
| comYC | Streptococcus mutans UA140 |
48.718 |
82.105 |
0.4 |
| comYC | Streptococcus mutans UA159 |
48.718 |
82.105 |
0.4 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
48 |
78.947 |
0.379 |
| comGC/cglC | Streptococcus mitis SK321 |
48 |
78.947 |
0.379 |