Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DWB95_RS06080 | Genome accession | NZ_CP031280 |
| Coordinates | 1245690..1246664 (+) | Length | 324 a.a. |
| NCBI ID | WP_154874385.1 | Uniprot ID | - |
| Organism | Staphylococcus pasteuri strain 3C | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1240690..1251664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB95_RS06045 (DWB95_06060) | rpmG | 1241124..1241273 (+) | 150 | WP_017636259.1 | 50S ribosomal protein L33 | - |
| DWB95_RS06050 (DWB95_06065) | - | 1241512..1242066 (+) | 555 | WP_029055745.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| DWB95_RS06055 (DWB95_06070) | - | 1242063..1243517 (+) | 1455 | WP_154874383.1 | rhomboid family intramembrane serine protease | - |
| DWB95_RS06060 (DWB95_06075) | - | 1243507..1243710 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| DWB95_RS06065 (DWB95_06080) | - | 1243707..1244693 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| DWB95_RS06070 (DWB95_06085) | - | 1244693..1245016 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| DWB95_RS06075 (DWB95_06090) | - | 1245020..1245643 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| DWB95_RS06080 (DWB95_06095) | comGA | 1245690..1246664 (+) | 975 | WP_154874385.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB95_RS06085 (DWB95_06100) | comGB | 1246636..1247703 (+) | 1068 | WP_029055748.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DWB95_RS06090 (DWB95_06105) | comGC | 1247751..1248038 (+) | 288 | WP_154874788.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB95_RS12550 | comGD | 1248016..1248465 (+) | 450 | WP_177244131.1 | competence type IV pilus minor pilin ComGD | - |
| DWB95_RS12555 | - | 1248497..1248745 (+) | 249 | WP_185817761.1 | hypothetical protein | - |
| DWB95_RS06105 (DWB95_06120) | - | 1249319..1249837 (+) | 519 | WP_186802334.1 | shikimate kinase | - |
| DWB95_RS06110 (DWB95_06125) | gcvT | 1250009..1251100 (+) | 1092 | WP_154874389.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37253.50 Da Isoelectric Point: 9.1458
>NTDB_id=305423 DWB95_RS06080 WP_154874385.1 1245690..1246664(+) (comGA) [Staphylococcus pasteuri strain 3C]
MKILFQEIINKGIAYKASDIHFIPMEHYVHIKFRVNDTLTPYETLDINIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGCESCVIRIVPQYFQSKKETYEFKDFKHFMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNNKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCRGAL
LRLLEMGVTVQELSQAINLISNQRLITTSHNHRQLVCELMFKNQINYFFEHNQTMPKSFKRLASKLDDMTKEGIICETIV
DKYI
MKILFQEIINKGIAYKASDIHFIPMEHYVHIKFRVNDTLTPYETLDINIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGCESCVIRIVPQYFQSKKETYEFKDFKHFMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNNKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCRGAL
LRLLEMGVTVQELSQAINLISNQRLITTSHNHRQLVCELMFKNQINYFFEHNQTMPKSFKRLASKLDDMTKEGIICETIV
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=305423 DWB95_RS06080 WP_154874385.1 1245690..1246664(+) (comGA) [Staphylococcus pasteuri strain 3C]
ATGAAGATTCTATTTCAAGAAATAATTAATAAAGGAATTGCATATAAAGCAAGTGATATACACTTTATTCCTATGGAGCA
TTATGTTCATATTAAATTTAGAGTAAATGATACATTAACACCTTATGAAACACTTGATATTAATATATATCGTAAGTTAT
TGGTGTTTATGAAATTCCAAGCTGGTTTAGATGTTTCTACACAACAAATCGCTCAAAGTGGCCGCTATACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACCCTTCCTTTATCAATTGGATGTGAAAGTTGTGTTATAAGAATTGTGCCTCA
ATATTTTCAAAGTAAAAAGGAAACATACGAGTTTAAAGATTTTAAACATTTTATGAATAAGAAGCAAGGTTTATTGCTTT
TTACTGGTCCTACAGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTTATGTATGCACAAAAAGAGTTAAACCTAAAT
GTTATTTCTATTGAAGATCCAGTTGAACAAATTTTAAAAGGTATTACTCAAATTTCTGTTAATAACAAAGCAGGTATTAC
TTACGCTAGTTCATTTAAAGCAATTTTAAGATGTGATCCAGACGTTATTTTAATCGGAGAAATTCGTGATGCCGAAATCG
CTAAATATGTTTTTCAAGCTAGTCTAAGTGGTCATTTGGTATTAAGTACATTACACGCCAATGATTGTAGAGGGGCTTTA
CTTAGATTATTAGAAATGGGAGTAACAGTTCAAGAATTATCTCAAGCTATAAATTTAATTTCCAATCAACGATTAATTAC
AACATCACATAATCATAGACAATTAGTGTGTGAACTAATGTTTAAAAATCAAATTAATTACTTTTTTGAACATAACCAAA
CGATGCCAAAATCTTTTAAACGATTAGCATCAAAATTAGATGATATGACAAAAGAAGGTATTATATGTGAAACTATTGTT
GATAAATATATTTAA
ATGAAGATTCTATTTCAAGAAATAATTAATAAAGGAATTGCATATAAAGCAAGTGATATACACTTTATTCCTATGGAGCA
TTATGTTCATATTAAATTTAGAGTAAATGATACATTAACACCTTATGAAACACTTGATATTAATATATATCGTAAGTTAT
TGGTGTTTATGAAATTCCAAGCTGGTTTAGATGTTTCTACACAACAAATCGCTCAAAGTGGCCGCTATACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACCCTTCCTTTATCAATTGGATGTGAAAGTTGTGTTATAAGAATTGTGCCTCA
ATATTTTCAAAGTAAAAAGGAAACATACGAGTTTAAAGATTTTAAACATTTTATGAATAAGAAGCAAGGTTTATTGCTTT
TTACTGGTCCTACAGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTTATGTATGCACAAAAAGAGTTAAACCTAAAT
GTTATTTCTATTGAAGATCCAGTTGAACAAATTTTAAAAGGTATTACTCAAATTTCTGTTAATAACAAAGCAGGTATTAC
TTACGCTAGTTCATTTAAAGCAATTTTAAGATGTGATCCAGACGTTATTTTAATCGGAGAAATTCGTGATGCCGAAATCG
CTAAATATGTTTTTCAAGCTAGTCTAAGTGGTCATTTGGTATTAAGTACATTACACGCCAATGATTGTAGAGGGGCTTTA
CTTAGATTATTAGAAATGGGAGTAACAGTTCAAGAATTATCTCAAGCTATAAATTTAATTTCCAATCAACGATTAATTAC
AACATCACATAATCATAGACAATTAGTGTGTGAACTAATGTTTAAAAATCAAATTAATTACTTTTTTGAACATAACCAAA
CGATGCCAAAATCTTTTAAACGATTAGCATCAAAATTAGATGATATGACAAAAGAAGGTATTATATGTGAAACTATTGTT
GATAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
72.531 |
100 |
0.725 |
| comGA | Staphylococcus aureus N315 |
72.531 |
100 |
0.725 |